Detailed information NTG0980455

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAFA14_RS10410
• Genome accession: NZ_CP151711
• Coordinates: 2182088..2182789 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain F15-06
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2177088..2187789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA14_RS10380 (AAFA14_10380)	-	2177395..2177838 (-)	444	WP_001246675.1	SRPBCC family protein	-
AAFA14_RS10385 (AAFA14_10385)	tadA	2177908..2178411 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AAFA14_RS10390 (AAFA14_10390)	-	2178418..2179542 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAFA14_RS10395 (AAFA14_10395)	ung	2179539..2180252 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AAFA14_RS10400 (AAFA14_10400)	-	2180303..2180899 (-)	597	WP_000908451.1	6-carboxytetrahydropterin synthase	-
AAFA14_RS10405 (AAFA14_10405)	gspK	2181129..2182088 (-)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AAFA14_RS10410 (AAFA14_10410)	xcpW	2182088..2182789 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAFA14_RS10415 (AAFA14_10415)	xcpV	2182789..2183169 (-)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAFA14_RS10420 (AAFA14_10420)	-	2183159..2183713 (-)	555	WP_000841379.1	type II secretion system protein	-
AAFA14_RS10425 (AAFA14_10425)	-	2183723..2184331 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAFA14_RS10430 (AAFA14_10430)	-	2184369..2185142 (-)	774	WP_000497298.1	TatD family hydrolase	-
AAFA14_RS10435 (AAFA14_10435)	-	2185160..2185501 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AAFA14_RS10440 (AAFA14_10440)	-	2185513..2186493 (-)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AAFA14_RS10445 (AAFA14_10445)	kdsB	2186505..2187266 (-)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=980455 AAFA14_RS10410 WP_000594572.1 2182088..2182789(-) (xcpW) [Acinetobacter baumannii strain F15-06]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=980455 AAFA14_RS10410 WP_000594572.1 2182088..2182789(-) (xcpW) [Acinetobacter baumannii strain F15-06]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991