Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA26_RS07955 | Genome accession | NZ_CP151705 |
| Coordinates | 1665859..1666239 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-02 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1660859..1671239
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA26_RS07925 (AAFA26_07925) | kdsB | 1661762..1662523 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AAFA26_RS07930 (AAFA26_07930) | - | 1662535..1663515 (+) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA26_RS07935 (AAFA26_07935) | - | 1663527..1663868 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA26_RS07940 (AAFA26_07940) | - | 1663886..1664659 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA26_RS07945 (AAFA26_07945) | - | 1664697..1665305 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA26_RS07950 (AAFA26_07950) | - | 1665315..1665869 (+) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA26_RS07955 (AAFA26_07955) | xcpV | 1665859..1666239 (+) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA26_RS07960 (AAFA26_07960) | xcpW | 1666239..1666940 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA26_RS07965 (AAFA26_07965) | gspK | 1666940..1667899 (+) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA26_RS07970 (AAFA26_07970) | - | 1668129..1668725 (+) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA26_RS07975 (AAFA26_07975) | ung | 1668776..1669489 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA26_RS07980 (AAFA26_07980) | - | 1669486..1670610 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA26_RS07985 (AAFA26_07985) | tadA | 1670617..1671120 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=980311 AAFA26_RS07955 WP_000836910.1 1665859..1666239(+) (xcpV) [Acinetobacter baumannii strain F19-02]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=980311 AAFA26_RS07955 WP_000836910.1 1665859..1666239(+) (xcpV) [Acinetobacter baumannii strain F19-02]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |