Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA18_RS10025 | Genome accession | NZ_CP151702 |
| Coordinates | 2089041..2089421 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-10-4 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2084041..2094421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA18_RS09995 (AAFA18_09995) | tadA | 2084160..2084663 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| AAFA18_RS10000 (AAFA18_10000) | - | 2084670..2085794 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA18_RS10005 (AAFA18_10005) | ung | 2085791..2086504 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA18_RS10010 (AAFA18_10010) | - | 2086555..2087151 (-) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA18_RS10015 (AAFA18_10015) | gspK | 2087381..2088340 (-) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA18_RS10020 (AAFA18_10020) | xcpW | 2088340..2089041 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA18_RS10025 (AAFA18_10025) | xcpV | 2089041..2089421 (-) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA18_RS10030 (AAFA18_10030) | - | 2089411..2089965 (-) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA18_RS10035 (AAFA18_10035) | - | 2089975..2090583 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA18_RS10040 (AAFA18_10040) | - | 2090621..2091394 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA18_RS10045 (AAFA18_10045) | - | 2091412..2091753 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA18_RS10050 (AAFA18_10050) | - | 2091765..2092745 (-) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA18_RS10055 (AAFA18_10055) | kdsB | 2092757..2093518 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=980223 AAFA18_RS10025 WP_000836910.1 2089041..2089421(-) (xcpV) [Acinetobacter baumannii strain F19-10-4]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=980223 AAFA18_RS10025 WP_000836910.1 2089041..2089421(-) (xcpV) [Acinetobacter baumannii strain F19-10-4]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |