Detailed information NTG0980190

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM40Z_RS21670
• Genome accession: NZ_CP182198
• Coordinates: 4467219..4468244 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC130
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4462219..4473244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM40Z_RS21660 (ACM40Z_21660)	rpmE	4464450..4464662 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM40Z_RS21665 (ACM40Z_21665)	priA	4464865..4467063 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ACM40Z_RS21670 (ACM40Z_21670)	cytR	4467219..4468244 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM40Z_RS21675 (ACM40Z_21675)	ftsN	4468336..4469295 (+)	960	WP_000068837.1	cell division protein FtsN	-
ACM40Z_RS21680 (ACM40Z_21680)	hslV	4469388..4469918 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM40Z_RS21685 (ACM40Z_21685)	hslU	4469928..4471259 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACM40Z_RS21690 (ACM40Z_21690)	menA	4471326..4472252 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM40Z_RS21695 (ACM40Z_21695)	rraA	4472345..4472830 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM40Z_RS21700 (ACM40Z_21700)	zapB	4472915..4473160 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=980190 ACM40Z_RS21670 WP_000644904.1 4467219..4468244(+) (cytR) [Escherichia coli strain EC130]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=980190 ACM40Z_RS21670 WP_000644904.1 4467219..4468244(+) (cytR) [Escherichia coli strain EC130]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628