Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA29_RS16495 | Genome accession | NZ_CP151700 |
| Coordinates | 3480050..3480475 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F19-10-8 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3475050..3485475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA29_RS16465 (AAFA29_16465) | - | 3475582..3476613 (+) | 1032 | Protein_3216 | lipase secretion chaperone | - |
| AAFA29_RS16470 (AAFA29_16470) | - | 3476728..3477669 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA29_RS16475 (AAFA29_16475) | rplS | 3477722..3478090 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA29_RS16480 (AAFA29_16480) | trmD | 3478298..3479038 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA29_RS16485 (AAFA29_16485) | rimM | 3479084..3479632 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA29_RS16490 (AAFA29_16490) | rpsP | 3479652..3479903 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA29_RS16495 (AAFA29_16495) | pilE | 3480050..3480475 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA29_RS16500 (AAFA29_16500) | pilY2 | 3480472..3480954 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA29_RS16505 (AAFA29_16505) | pilY1 | 3480967..3484821 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=980182 AAFA29_RS16495 WP_000788337.1 3480050..3480475(-) (pilE) [Acinetobacter baumannii strain F19-10-8]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=980182 AAFA29_RS16495 WP_000788337.1 3480050..3480475(-) (pilE) [Acinetobacter baumannii strain F19-10-8]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |