Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA29_RS07980 | Genome accession | NZ_CP151700 |
| Coordinates | 1668228..1668608 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-10-8 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1663228..1673608
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA29_RS07950 (AAFA29_07950) | kdsB | 1664131..1664892 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AAFA29_RS07955 (AAFA29_07955) | - | 1664904..1665884 (+) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA29_RS07960 (AAFA29_07960) | - | 1665896..1666237 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA29_RS07965 (AAFA29_07965) | - | 1666255..1667028 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA29_RS07970 (AAFA29_07970) | - | 1667066..1667674 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA29_RS07975 (AAFA29_07975) | - | 1667684..1668238 (+) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA29_RS07980 (AAFA29_07980) | xcpV | 1668228..1668608 (+) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA29_RS07985 (AAFA29_07985) | xcpW | 1668608..1669309 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA29_RS07990 (AAFA29_07990) | gspK | 1669309..1670268 (+) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA29_RS07995 (AAFA29_07995) | - | 1670498..1671094 (+) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA29_RS08000 (AAFA29_08000) | ung | 1671145..1671858 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA29_RS08005 (AAFA29_08005) | - | 1671855..1672979 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA29_RS08010 (AAFA29_08010) | tadA | 1672986..1673489 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=980172 AAFA29_RS07980 WP_000836910.1 1668228..1668608(+) (xcpV) [Acinetobacter baumannii strain F19-10-8]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=980172 AAFA29_RS07980 WP_000836910.1 1668228..1668608(+) (xcpV) [Acinetobacter baumannii strain F19-10-8]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |