Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA28_RS11185 | Genome accession | NZ_CP151699 |
| Coordinates | 2333977..2334357 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-10-9 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2328977..2339357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA28_RS11155 (AAFA28_11155) | tadA | 2329096..2329599 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| AAFA28_RS11160 (AAFA28_11160) | - | 2329606..2330730 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA28_RS11165 (AAFA28_11165) | ung | 2330727..2331440 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA28_RS11170 (AAFA28_11170) | - | 2331491..2332087 (-) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA28_RS11175 (AAFA28_11175) | gspK | 2332317..2333276 (-) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA28_RS11180 (AAFA28_11180) | xcpW | 2333276..2333977 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA28_RS11185 (AAFA28_11185) | xcpV | 2333977..2334357 (-) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA28_RS11190 (AAFA28_11190) | - | 2334347..2334901 (-) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA28_RS11195 (AAFA28_11195) | - | 2334911..2335519 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA28_RS11200 (AAFA28_11200) | - | 2335557..2336330 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA28_RS11205 (AAFA28_11205) | - | 2336348..2336689 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA28_RS11210 (AAFA28_11210) | - | 2336701..2337681 (-) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA28_RS11215 (AAFA28_11215) | kdsB | 2337693..2338454 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=980133 AAFA28_RS11185 WP_000836910.1 2333977..2334357(-) (xcpV) [Acinetobacter baumannii strain F19-10-9]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=980133 AAFA28_RS11185 WP_000836910.1 2333977..2334357(-) (xcpV) [Acinetobacter baumannii strain F19-10-9]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |