Detailed information NTG0980083

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAFA24_RS10035
• Genome accession: NZ_CP151697
• Coordinates: 2092127..2092828 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain F19-10-MH6
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2087127..2097828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA24_RS10005 (AAFA24_10005)	-	2087434..2087877 (-)	444	WP_001246675.1	SRPBCC family protein	-
AAFA24_RS10010 (AAFA24_10010)	tadA	2087947..2088450 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AAFA24_RS10015 (AAFA24_10015)	-	2088457..2089581 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAFA24_RS10020 (AAFA24_10020)	ung	2089578..2090291 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AAFA24_RS10025 (AAFA24_10025)	-	2090342..2090938 (-)	597	WP_000908451.1	6-carboxytetrahydropterin synthase	-
AAFA24_RS10030 (AAFA24_10030)	gspK	2091168..2092127 (-)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AAFA24_RS10035 (AAFA24_10035)	xcpW	2092127..2092828 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAFA24_RS10040 (AAFA24_10040)	xcpV	2092828..2093208 (-)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAFA24_RS10045 (AAFA24_10045)	-	2093198..2093752 (-)	555	WP_000841379.1	type II secretion system protein	-
AAFA24_RS10050 (AAFA24_10050)	-	2093762..2094370 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAFA24_RS10055 (AAFA24_10055)	-	2094408..2095181 (-)	774	WP_000497298.1	TatD family hydrolase	-
AAFA24_RS10060 (AAFA24_10060)	-	2095199..2095540 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AAFA24_RS10065 (AAFA24_10065)	-	2095552..2096532 (-)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AAFA24_RS10070 (AAFA24_10070)	kdsB	2096544..2097305 (-)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=980083 AAFA24_RS10035 WP_000594572.1 2092127..2092828(-) (xcpW) [Acinetobacter baumannii strain F19-10-MH6]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=980083 AAFA24_RS10035 WP_000594572.1 2092127..2092828(-) (xcpW) [Acinetobacter baumannii strain F19-10-MH6]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991