Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | AAFA12_RS01565 | Genome accession | NZ_CP151696 |
| Coordinates | 320672..321199 (+) | Length | 175 a.a. |
| NCBI ID | WP_000695061.1 | Uniprot ID | A0A506J6X2 |
| Organism | Acinetobacter baumannii strain F19-10-MH12 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 315672..326199
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA12_RS01550 (AAFA12_01550) | pilM | 318225..319283 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| AAFA12_RS01555 (AAFA12_01555) | pilN | 319283..319924 (+) | 642 | WP_000201221.1 | PilN domain-containing protein | Machinery gene |
| AAFA12_RS01560 (AAFA12_01560) | pilO | 319921..320661 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AAFA12_RS01565 (AAFA12_01565) | pilP | 320672..321199 (+) | 528 | WP_000695061.1 | pilus assembly protein PilP | Machinery gene |
| AAFA12_RS01570 (AAFA12_01570) | pilQ | 321262..323427 (+) | 2166 | WP_001017029.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AAFA12_RS01575 (AAFA12_01575) | aroK | 323439..324008 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| AAFA12_RS01580 (AAFA12_01580) | aroB | 324037..325119 (+) | 1083 | WP_001194249.1 | 3-dehydroquinate synthase | - |
| AAFA12_RS01585 (AAFA12_01585) | - | 325135..326010 (+) | 876 | WP_000218808.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19445.72 Da Isoelectric Point: 8.9898
>NTDB_id=980019 AAFA12_RS01565 WP_000695061.1 320672..321199(+) (pilP) [Acinetobacter baumannii strain F19-10-MH12]
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRIIHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLIGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRIIHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=980019 AAFA12_RS01565 WP_000695061.1 320672..321199(+) (pilP) [Acinetobacter baumannii strain F19-10-MH12]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTATCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTATCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTATCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.857 |
100 |
0.989 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |