Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAFA13_RS10930 | Genome accession | NZ_CP151690 |
| Coordinates | 2313977..2314357 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain F19-10-CH8 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2308977..2319357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA13_RS10900 (AAFA13_10900) | tadA | 2309096..2309599 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| AAFA13_RS10905 (AAFA13_10905) | - | 2309606..2310730 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAFA13_RS10910 (AAFA13_10910) | ung | 2310727..2311440 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AAFA13_RS10915 (AAFA13_10915) | - | 2311491..2312087 (-) | 597 | WP_000908451.1 | 6-carboxytetrahydropterin synthase | - |
| AAFA13_RS10920 (AAFA13_10920) | gspK | 2312317..2313276 (-) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| AAFA13_RS10925 (AAFA13_10925) | xcpW | 2313276..2313977 (-) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAFA13_RS10930 (AAFA13_10930) | xcpV | 2313977..2314357 (-) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAFA13_RS10935 (AAFA13_10935) | - | 2314347..2314901 (-) | 555 | WP_000841379.1 | type II secretion system protein | - |
| AAFA13_RS10940 (AAFA13_10940) | - | 2314911..2315519 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAFA13_RS10945 (AAFA13_10945) | - | 2315557..2316330 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AAFA13_RS10950 (AAFA13_10950) | - | 2316348..2316689 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAFA13_RS10955 (AAFA13_10955) | - | 2316701..2317681 (-) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| AAFA13_RS10960 (AAFA13_10960) | kdsB | 2317693..2318454 (-) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=979902 AAFA13_RS10930 WP_000836910.1 2313977..2314357(-) (xcpV) [Acinetobacter baumannii strain F19-10-CH8]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=979902 AAFA13_RS10930 WP_000836910.1 2313977..2314357(-) (xcpV) [Acinetobacter baumannii strain F19-10-CH8]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |