Detailed information NTG0979813

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AAE485_RS01000
• Genome accession: NZ_CP151686
• Coordinates: 190765..191721 (-)
• Length: 318 a.a.
• NCBI ID: WP_409409258.1
• Uniprot ID: -
• Organism: Acidithiobacillus ferriphilus strain QBS3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 185765..196721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAE485_RS00970 (AAE485_00960)	hslV	186054..186593 (+)	540	WP_014028037.1	ATP-dependent protease subunit HslV	-
AAE485_RS00975 (AAE485_00965)	hslU	186596..187918 (+)	1323	WP_215860484.1	ATP-dependent protease ATPase subunit HslU	-
AAE485_RS00980 (AAE485_00970)	-	187940..188263 (-)	324	WP_229066453.1	hypothetical protein	-
AAE485_RS00985 (AAE485_00975)	rpoH	188269..189120 (-)	852	WP_215860485.1	RNA polymerase sigma factor RpoH	-
AAE485_RS00990 (AAE485_00980)	ftsX	189195..190100 (-)	906	WP_215849236.1	permease-like cell division protein FtsX	-
AAE485_RS00995 (AAE485_00985)	ftsE	190097..190768 (-)	672	WP_064219201.1	cell division ATP-binding protein FtsE	-
AAE485_RS01000 (AAE485_00990)	pilA	190765..191721 (-)	957	WP_409409258.1	signal recognition particle-docking protein FtsY	Machinery gene
AAE485_RS01005 (AAE485_00995)	rsmD	191952..192521 (+)	570	WP_215860487.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AAE485_RS01010 (AAE485_01000)	coaD	192514..193038 (+)	525	WP_064219204.1	pantetheine-phosphate adenylyltransferase	-
AAE485_RS01015 (AAE485_01005)	-	193068..193319 (+)	252	WP_064219205.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AAE485_RS01020 (AAE485_01010)	-	193303..195282 (-)	1980	WP_409409259.1	dynamin family protein	-
AAE485_RS01025 (AAE485_01015)	mutM	195299..196111 (-)	813	WP_409409260.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 34182.22 Da
• Isoelectric Point: 7.4265

>NTDB_id=979813 AAE485_RS01000 WP_409409258.1 190765..191721(-) (pilA) [Acidithiobacillus ferriphilus strain QBS3]
MPTEALSDTPGKGLFSRLRQGLTRSREQLVEGVGRLVRGKKVIDAELLEDLEALLLQADLGTAATREIMDSVAERVHRKE
LTDPNALQTALRESLLDILRPRAQPWSPEKGRSQVLLMVGINGAGKTTTIGKLAAHWKAEGFGIVLAAGDTFRAAAVEQL
QGWGKRVQVPVVAQGTGADSASVIFDALTTTRARGSELLIADTAGRLHTQGHLMEELKKIKRVLGKQDPEAPQQIWLVLD
AGTGQNALNQVRQFHDAIGLTGICITKLDGTAKGGVVAAIARAVPIPIRYIGVGEQVEDLRPFDPESFVDALFAESKS

Nucleotide

• Length: 957 bp

>NTDB_id=979813 AAE485_RS01000 WP_409409258.1 190765..191721(-) (pilA) [Acidithiobacillus ferriphilus strain QBS3]
ATGCCGACAGAAGCCCTTTCCGATACACCCGGAAAAGGGCTTTTCTCCCGTCTTCGACAAGGCCTGACCCGAAGCCGGGA
ACAATTGGTCGAGGGCGTGGGGCGTCTGGTACGCGGTAAAAAGGTTATTGATGCGGAATTGCTGGAAGACCTGGAAGCCT
TACTGCTGCAAGCTGATCTGGGCACGGCTGCAACCCGGGAAATCATGGACAGCGTGGCGGAGCGGGTACATCGCAAGGAA
CTCACGGACCCCAACGCGCTCCAGACGGCGTTGCGCGAGTCACTCCTCGACATCCTGCGTCCCCGCGCGCAACCTTGGTC
GCCCGAGAAGGGGCGCTCCCAGGTATTGCTCATGGTGGGTATCAACGGCGCGGGTAAAACGACCACCATCGGTAAGCTGG
CTGCGCACTGGAAGGCGGAGGGTTTCGGTATTGTCCTCGCCGCCGGAGACACCTTCCGCGCCGCCGCCGTGGAGCAGTTA
CAGGGCTGGGGTAAACGGGTGCAGGTGCCCGTGGTGGCGCAGGGGACGGGCGCCGACAGCGCTTCCGTGATCTTTGATGC
GCTGACTACGACCCGCGCGCGCGGCAGCGAGTTGCTCATCGCCGATACCGCCGGACGCCTTCATACCCAGGGTCATCTCA
TGGAAGAATTGAAGAAGATCAAGCGGGTCCTTGGCAAACAGGACCCGGAGGCGCCACAACAGATCTGGCTGGTGCTGGAC
GCGGGCACCGGCCAGAATGCCCTTAATCAGGTGCGTCAGTTTCACGATGCGATAGGGTTGACGGGTATTTGCATCACCAA
GCTGGATGGCACCGCCAAAGGTGGCGTGGTGGCGGCCATTGCCAGGGCCGTGCCCATTCCCATTCGCTATATCGGTGTTG
GTGAGCAGGTCGAAGATCTACGTCCTTTTGACCCCGAATCTTTTGTCGATGCCCTTTTTGCGGAGTCGAAGTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-95)

• SRP54-type protein, GTPase domain (SRP54) (114-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.974	94.969	0.513