Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AADZ70_RS19100 Genome accession   NZ_CP151679
Coordinates   3790364..3791155 (+) Length   263 a.a.
NCBI ID   WP_342007494.1    Uniprot ID   -
Organism   Bacillus sp. YBsi01     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3785364..3796155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS19075 (AADZ70_19075) - 3787361..3788244 (+) 884 Protein_3696 PhzF family phenazine biosynthesis isomerase -
  AADZ70_RS19080 (AADZ70_19080) - 3788321..3788905 (+) 585 WP_047476552.1 nitroreductase -
  AADZ70_RS19085 (AADZ70_19085) - 3788944..3789135 (-) 192 WP_064778744.1 YfhD family protein -
  AADZ70_RS19090 (AADZ70_19090) - 3789206..3789316 (-) 111 WP_003155504.1 YfhE family protein -
  AADZ70_RS19095 (AADZ70_19095) - 3789374..3790273 (-) 900 WP_326352433.1 TIGR01777 family oxidoreductase -
  AADZ70_RS19100 (AADZ70_19100) recX 3790364..3791155 (+) 792 WP_342007494.1 recombination regulator RecX Regulator
  AADZ70_RS19105 (AADZ70_19105) - 3791162..3791476 (+) 315 WP_045925459.1 YfhH family protein -
  AADZ70_RS19110 (AADZ70_19110) - 3791619..3792812 (+) 1194 WP_342008076.1 MFS transporter -
  AADZ70_RS19115 (AADZ70_19115) - 3792996..3793148 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  AADZ70_RS19120 (AADZ70_19120) - 3793272..3793541 (+) 270 WP_016936717.1 YfhJ family protein -
  AADZ70_RS19125 (AADZ70_19125) - 3793675..3794202 (+) 528 WP_016936716.1 SH3 domain-containing protein -
  AADZ70_RS19130 (AADZ70_19130) - 3794288..3794620 (+) 333 WP_342007495.1 SdpI family protein -
  AADZ70_RS19135 (AADZ70_19135) - 3794617..3795477 (+) 861 WP_016936714.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31058.35 Da        Isoelectric Point: 6.2747

>NTDB_id=979726 AADZ70_RS19100 WP_342007494.1 3790364..3791155(+) (recX) [Bacillus sp. YBsi01]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDEVKKAFNRAVDFLSYRMRSEKEV
RDHLKKKETPEMVIPEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKIHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=979726 AADZ70_RS19100 WP_342007494.1 3790364..3791155(+) (recX) [Bacillus sp. YBsi01]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAACACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTCGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGAAGTGAAAAAAGCCTTTAACCGCGCCGTAGATTTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGACCATCTGAAGAAAAAAGAAACACCTGAGATGGTCATTCCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCTTATGCAAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGATGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGGAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTTCCATTCGACGTCATCAACGCCGCCCTGGAGCAGACGGAGTATGAGAATGATGACGAAGCTG
AGATGGAAGCCCTGAAGATTCATGCGGAAAAGGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGAACAATTTTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

80.228

100

0.802

Multiple sequence alignment