Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/comD1   Type   Regulator
Locus tag   ACGHT2_RS10000 Genome accession   NZ_AP031455
Coordinates   1911940..1913247 (-) Length   435 a.a.
NCBI ID   WP_270619824.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   phosphorylation of ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1906940..1918247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS09950 (K460107A9_18720) rpe 1907408..1908070 (-) 663 WP_003066548.1 ribulose-phosphate 3-epimerase -
  ACGHT2_RS09955 (K460107A9_18730) rsgA 1908077..1908949 (-) 873 WP_058692505.1 ribosome small subunit-dependent GTPase A -
  ACGHT2_RS09970 (K460107A9_18740) - 1909407..1909607 (-) 201 WP_058692506.1 hypothetical protein -
  ACGHT2_RS09975 (K460107A9_18750) - 1909816..1910157 (-) 342 WP_195990867.1 bacteriocin immunity protein -
  ACGHT2_RS09980 (K460107A9_18760) - 1910208..1910435 (-) 228 WP_048791098.1 hypothetical protein -
  ACGHT2_RS09985 (K460107A9_18770) - 1910708..1911019 (-) 312 WP_048791097.1 bacteriocin immunity protein -
  ACGHT2_RS09990 (K460107A9_18780) - 1911188..1911487 (-) 300 WP_195990865.1 DUF3884 family protein -
  ACGHT2_RS09995 (K460107A9_18790) comC/comC1 1911778..1911918 (+) 141 WP_195990863.1 competence protein Regulator
  ACGHT2_RS10000 (K460107A9_18800) comD/comD1 1911940..1913247 (-) 1308 WP_270619824.1 sensor histidine kinase Regulator
  ACGHT2_RS10005 (K460107A9_18810) comE/comE1 1913255..1913986 (-) 732 WP_058692509.1 response regulator transcription factor Regulator
  ACGHT2_RS10010 (K460107A9_18820) - 1914003..1914287 (-) 285 WP_003066573.1 LytTR family DNA-binding domain-containing protein -
  ACGHT2_RS10015 (K460107A9_18830) - 1914530..1914730 (-) 201 WP_058692510.1 hypothetical protein -
  ACGHT2_RS10020 (K460107A9_18840) - 1914985..1915998 (-) 1014 WP_003066577.1 hypothetical protein -
  ACGHT2_RS10025 (K460107A9_18850) - 1916170..1916466 (-) 297 WP_003066579.1 bacteriocin immunity protein -
  ACGHT2_RS10030 (K460107A9_18860) - 1916466..1916684 (-) 219 WP_003066580.1 Blp family class II bacteriocin -
  ACGHT2_RS10035 (K460107A9_18880) - 1917260..1917490 (-) 231 WP_058692512.1 bacteriocin class II family protein -
  ACGHT2_RS10040 - 1917683..1917802 (-) 120 WP_253066439.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACGHT2_RS10045 - 1917799..1918146 (-) 348 WP_231729919.1 CPBP family intramembrane glutamic endopeptidase -

Sequence

Protein


Download         Length: 435 a.a.        Molecular weight: 50960.76 Da        Isoelectric Point: 6.8471

>NTDB_id=97972 ACGHT2_RS10000 WP_270619824.1 1911940..1913247(-) (comD/comD1) [Streptococcus pasteurianus strain k46-0107-A9]
MSDYLSELAYYPVIMLIYSNVRGEKLKLWEIVTIAVAFFVIDFTWFYTIIGRILILMFLSYLRDKTLPFSLYVFYGSFTW
VIESIIIRMISFFILPIFHLNYIDLSKSDGLFAIVETLVVIIYFLMVKLSKIDFQTFIMLSEVKKLRKILIFTDITMVFY
YIAIEFLTGVEFQGGVPTLLYRQWLVVLYFTFFILMLFYMNRSYQNWLEKEVSLARKQELHSLSVYSKQIEGLYEELRAF
RHDYANILASLKEGIDQNDMSMVRNIYNAVLEDSGKFIQHNRFNIGRLTNIDNDAIKSLLSAKFLEAESHHIEVELEVKD
KIGTPDIPLLDYVRLVSILCDNAIEAAIEAEKPAMIIACFYQGDDYLLIIDNTTKEERVPVELIYQKNYSSKGFGRGVGL
KTVNQMLKKYPNMSVQTSSKNYHFRQTIRIKKSFD

Nucleotide


Download         Length: 1308 bp        

>NTDB_id=97972 ACGHT2_RS10000 WP_270619824.1 1911940..1913247(-) (comD/comD1) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAGTGATTATCTAAGTGAACTAGCTTACTATCCTGTGATTATGTTGATTTACTCTAATGTTAGAGGAGAAAAACTGAA
ATTGTGGGAAATAGTAACGATAGCTGTTGCTTTCTTCGTCATTGATTTTACATGGTTTTATACTATTATCGGTCGTATTT
TAATATTGATGTTTCTATCTTATTTGAGAGATAAAACCTTGCCCTTTTCTCTATACGTATTTTATGGGAGTTTCACTTGG
GTCATTGAGAGTATTATCATTAGGATGATTAGTTTTTTTATTCTTCCAATATTTCATCTCAATTATATTGACTTGAGTAA
AAGTGATGGGTTGTTTGCTATTGTAGAAACTTTAGTAGTAATCATATATTTCTTAATGGTAAAACTTTCTAAAATTGATT
TTCAAACTTTCATTATGCTGAGCGAGGTGAAGAAACTAAGAAAAATTTTAATCTTTACTGATATAACTATGGTATTTTAT
TATATAGCTATAGAATTCTTGACAGGGGTTGAATTTCAAGGAGGAGTTCCAACTTTACTTTATCGCCAATGGTTGGTGGT
TCTCTATTTCACTTTCTTCATTTTAATGCTGTTTTATATGAATCGCTCTTATCAAAATTGGCTTGAGAAAGAAGTATCGT
TAGCGCGAAAACAAGAACTGCATTCTTTGTCGGTATATAGCAAGCAAATCGAAGGCTTATATGAGGAACTAAGAGCTTTT
CGTCATGATTATGCTAATATCTTAGCGAGTTTAAAAGAGGGAATCGACCAAAATGATATGAGTATGGTGAGGAATATTTA
TAATGCTGTTTTAGAGGATTCTGGAAAGTTTATTCAGCATAATCGCTTCAATATTGGACGATTGACTAATATTGATAATG
ATGCGATAAAAAGCCTTTTATCAGCTAAATTTTTAGAAGCGGAATCTCATCATATTGAGGTAGAATTAGAAGTTAAAGAT
AAAATTGGAACTCCAGATATTCCTTTGTTAGATTATGTGCGGCTCGTCTCCATTTTATGTGACAATGCGATTGAAGCGGC
TATTGAAGCTGAAAAGCCTGCCATGATTATTGCTTGTTTCTATCAAGGGGATGACTATTTACTAATTATAGATAACACCA
CAAAAGAAGAGCGAGTTCCTGTGGAATTGATTTACCAGAAGAATTATTCAAGTAAGGGCTTTGGACGAGGTGTTGGTCTT
AAAACGGTTAACCAGATGTTGAAAAAGTATCCAAATATGTCGGTACAAACATCAAGCAAGAATTATCATTTCAGACAAAC
AATACGAATCAAAAAATCATTCGACTGA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(330-430)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/comD1 Streptococcus equinus JB1

76.293

53.333

0.407

Multiple sequence alignment