Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AADZ70_RS15530 | Genome accession | NZ_CP151679 |
| Coordinates | 3081122..3083557 (+) | Length | 811 a.a. |
| NCBI ID | WP_016935916.1 | Uniprot ID | - |
| Organism | Bacillus sp. YBsi01 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3076122..3088557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AADZ70_RS15515 (AADZ70_15515) | ctsR | 3078999..3079463 (+) | 465 | WP_016935919.1 | transcriptional regulator CtsR | - |
| AADZ70_RS15520 (AADZ70_15520) | - | 3079477..3080034 (+) | 558 | WP_016935918.1 | UvrB/UvrC motif-containing protein | - |
| AADZ70_RS15525 (AADZ70_15525) | - | 3080034..3081125 (+) | 1092 | WP_016935917.1 | protein arginine kinase | - |
| AADZ70_RS15530 (AADZ70_15530) | clpC | 3081122..3083557 (+) | 2436 | WP_016935916.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| AADZ70_RS15535 (AADZ70_15535) | radA | 3083651..3085030 (+) | 1380 | WP_016935915.1 | DNA repair protein RadA | Machinery gene |
| AADZ70_RS15540 (AADZ70_15540) | disA | 3085034..3086116 (+) | 1083 | WP_003156401.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| AADZ70_RS15545 (AADZ70_15545) | - | 3086230..3087330 (+) | 1101 | WP_045927008.1 | PIN/TRAM domain-containing protein | - |
| AADZ70_RS15550 (AADZ70_15550) | ispD | 3087344..3088042 (+) | 699 | WP_342007299.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| AADZ70_RS15555 (AADZ70_15555) | ispF | 3088035..3088511 (+) | 477 | WP_016935912.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90134.55 Da Isoelectric Point: 5.7558
>NTDB_id=979717 AADZ70_RS15530 WP_016935916.1 3081122..3083557(+) (clpC) [Bacillus sp. YBsi01]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
Nucleotide
Download Length: 2436 bp
>NTDB_id=979717 AADZ70_RS15530 WP_016935916.1 3081122..3083557(+) (clpC) [Bacillus sp. YBsi01]
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGGCAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTAGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCATATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTACTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGGCATCTGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAATAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCAGGCACGAAATACCGCGGAGAATTTGAAGACCGTCTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGCG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGTCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCTATTACCGATGAAGCAATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCAACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCGCGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGTTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATTCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGC
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGATGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGGCAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTAGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCATATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTACTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGGCATCTGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAATAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCAGGCACGAAATACCGCGGAGAATTTGAAGACCGTCTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGCG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGTCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCTATTACCGATGAAGCAATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCAACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCGCGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGTTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATTCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGC
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGATGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.424 |
100 |
0.964 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.813 |
99.014 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
44.511 |
100 |
0.455 |
| clpC | Streptococcus pneumoniae D39 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae Rx1 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.141 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
53.929 |
80.025 |
0.432 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae Rx1 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae D39 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.568 |
81.628 |
0.429 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.291 |
84.834 |
0.427 |