Detailed information NTG0979710

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AADZ70_RS13355
• Genome accession: NZ_CP151679
• Coordinates: 2663723..2664868 (+)
• Length: 381 a.a.
• NCBI ID: WP_016937593.1
• Uniprot ID: -
• Organism: Bacillus sp. YBsi01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2658723..2669868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADZ70_RS13335 (AADZ70_13335)	-	2659864..2660292 (-)	429	WP_016937596.1	DUF1934 domain-containing protein	-
AADZ70_RS13340 (AADZ70_13340)	-	2660446..2660714 (+)	269	Protein_2612	hypothetical protein	-
AADZ70_RS13345 (AADZ70_13345)	-	2660721..2662097 (-)	1377	WP_016937595.1	YncE family protein	-
AADZ70_RS13350 (AADZ70_13350)	-	2662137..2663492 (-)	1356	WP_342007166.1	YncE family protein	-
AADZ70_RS13355 (AADZ70_13355)	rapF	2663723..2664868 (+)	1146	WP_016937593.1	tetratricopeptide repeat protein	Regulator
AADZ70_RS13360 (AADZ70_13360)	-	2664852..2664971 (+)	120	WP_115996635.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
AADZ70_RS13365 (AADZ70_13365)	speB	2665105..2665977 (-)	873	WP_016937592.1	agmatinase	-
AADZ70_RS13370 (AADZ70_13370)	speE	2666037..2666867 (-)	831	WP_013353957.1	spermidine synthase	-
AADZ70_RS13375 (AADZ70_13375)	-	2667067..2669139 (+)	2073	WP_188154328.1	transglycosylase domain-containing protein	-
AADZ70_RS13380 (AADZ70_13380)	-	2669164..2669595 (-)	432	WP_188154327.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45588.88 Da
• Isoelectric Point: 4.7505

>NTDB_id=979710 AADZ70_RS13355 WP_016937593.1 2663723..2664868(+) (rapF) [Bacillus sp. YBsi01]
MASVVSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELASLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVTDQIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKNGDNYSIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELDQQPQLMGRTLFNIALCYNNQNNKDE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLECLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=979710 AADZ70_RS13355 WP_016937593.1 2663723..2664868(+) (rapF) [Bacillus sp. YBsi01]
GTGGCGAGTGTTGTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTATATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAAGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGCCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAGTATCTTTCAGCTATTCAGTTTTTTAAGAAAGCTGAAAGCAAATTGACGTACG
TTACAGATCAGATAGAAAAAGCGGAATTTTACTTTAAGATGTCAGAAGTCTATTACTATATGAAACAAACTTATGTTTCA
ATGGACTATGCGCGGCAAGCTTATTTAATTTATAAAAATGGGGATAATTATAGCATTAGGTTGACTCAGTGCCATTCTTT
GTTTGGCGCTAATTATCTTGATGTAAAGCAATATGATCATGCAATATCCCACTTTCAAAAAGCATATACGATGGCTGAAC
TGGATCAGCAGCCTCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCTACAATAATCAAAATAATAAAGATGAA
GCCATTCCTCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAGTTTAAATTTTTGGAATGTTTGTATATGCCGGATCCAAGAGATACGTTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTATACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (223-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.291	100	0.693
rapC	Bacillus subtilis subsp. subtilis str. 168	53.158	99.738	0.53