Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AADZ70_RS03090 Genome accession   NZ_CP151679
Coordinates   537751..538347 (+) Length   198 a.a.
NCBI ID   WP_047475244.1    Uniprot ID   A0AAE2TKS8
Organism   Bacillus sp. YBsi01     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 532751..543347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS03060 (AADZ70_03060) - 532942..533397 (+) 456 WP_342007707.1 flavodoxin -
  AADZ70_RS03065 (AADZ70_03065) dapD 533479..534189 (+) 711 WP_047475251.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AADZ70_RS03070 (AADZ70_03070) - 534260..535384 (+) 1125 WP_264820071.1 N-acetyldiaminopimelate deacetylase -
  AADZ70_RS03075 (AADZ70_03075) - 535445..535690 (+) 246 WP_013352084.1 YkuS family protein -
  AADZ70_RS03080 (AADZ70_03080) - 535724..536530 (-) 807 WP_047475248.1 mechanosensitive ion channel family protein -
  AADZ70_RS03085 (AADZ70_03085) - 536825..537283 (+) 459 WP_047475246.1 TlpA disulfide reductase family protein -
  AADZ70_RS03090 (AADZ70_03090) rok 537751..538347 (+) 597 WP_047475244.1 transcriptional regulator Rok Regulator
  AADZ70_RS03095 (AADZ70_03095) - 538369..539343 (-) 975 WP_016936291.1 hypothetical protein -
  AADZ70_RS03100 (AADZ70_03100) - 539488..540090 (+) 603 WP_342007708.1 molybdenum cofactor guanylyltransferase -
  AADZ70_RS03105 (AADZ70_03105) - 540142..541161 (+) 1020 WP_099744288.1 molybdopterin-synthase adenylyltransferase MoeB -
  AADZ70_RS03110 (AADZ70_03110) glp 541179..542471 (+) 1293 WP_016936288.1 gephyrin-like molybdotransferase Glp -
  AADZ70_RS03115 (AADZ70_03115) mobB 542432..542953 (+) 522 WP_342007709.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.4832

>NTDB_id=979669 AADZ70_RS03090 WP_047475244.1 537751..538347(+) (rok) [Bacillus sp. YBsi01]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETEETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=979669 AADZ70_RS03090 WP_047475244.1 537751..538347(+) (rok) [Bacillus sp. YBsi01]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAGGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGAGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCTGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGCGACTCTCTCCCAGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTACCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAAATGCAGTCTATTACGTCCCTTCCCGCCGGCATTCCGGATGGTTCTACAAGAAG
AAGAAGAGGGACGGCAAGACCGGGTTCAAAAGCGGCAAAACTGCGCGAAGCAGCCATTAAAACGTTGAAGCGCCACAATG
CGGCGATCAAAAGTTCGGAGCTGCAAAAGGAAATTGAGAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACGTTTATG
CAAAGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGAAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.567

97.98

0.838

Multiple sequence alignment