Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AADZ70_RS02990 Genome accession   NZ_CP151679
Coordinates   521861..522325 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus sp. YBsi01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 516861..527325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS02970 (AADZ70_02970) - 517341..519161 (+) 1821 WP_016936314.1 PAS domain-containing protein -
  AADZ70_RS02975 (AADZ70_02975) - 519186..520355 (-) 1170 WP_016936313.1 aminotransferase A -
  AADZ70_RS02980 (AADZ70_02980) - 520557..520718 (-) 162 WP_099744299.1 hypothetical protein -
  AADZ70_RS02985 (AADZ70_02985) cheV 520907..521818 (+) 912 WP_049628385.1 chemotaxis protein CheV -
  AADZ70_RS02990 (AADZ70_02990) kre 521861..522325 (-) 465 WP_013352067.1 YkyB family protein Regulator
  AADZ70_RS02995 (AADZ70_02995) - 522448..523740 (-) 1293 WP_099744298.1 MFS transporter -
  AADZ70_RS03000 (AADZ70_03000) - 523816..524310 (-) 495 WP_099744366.1 L,D-transpeptidase family protein -
  AADZ70_RS03005 (AADZ70_03005) - 524385..525248 (-) 864 WP_045926903.1 metallophosphoesterase -
  AADZ70_RS03010 (AADZ70_03010) fadH 525392..526156 (+) 765 WP_099744297.1 2,4-dienoyl-CoA reductase -
  AADZ70_RS03015 (AADZ70_03015) - 526271..526828 (+) 558 WP_342007704.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=979668 AADZ70_RS02990 WP_013352067.1 521861..522325(-) (kre) [Bacillus sp. YBsi01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=979668 AADZ70_RS02990 WP_013352067.1 521861..522325(-) (kre) [Bacillus sp. YBsi01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTAGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935

Multiple sequence alignment