Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   AADZ70_RS01390 Genome accession   NZ_CP151679
Coordinates   255095..256924 (+) Length   609 a.a.
NCBI ID   WP_099745180.1    Uniprot ID   -
Organism   Bacillus sp. YBsi01     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 250095..261924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS01360 (AADZ70_01360) - 250757..251335 (+) 579 WP_045925331.1 GNAT family N-acetyltransferase -
  AADZ70_RS01365 (AADZ70_01365) spx 251514..251909 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  AADZ70_RS01370 (AADZ70_01370) - 251967..252623 (-) 657 WP_016938229.1 TerC family protein -
  AADZ70_RS01375 (AADZ70_01375) - 252806..252908 (+) 103 Protein_254 hypothetical protein -
  AADZ70_RS01380 (AADZ70_01380) mecA 252899..253555 (+) 657 WP_045925332.1 adaptor protein MecA Regulator
  AADZ70_RS01385 (AADZ70_01385) - 253706..254866 (+) 1161 WP_342007584.1 competence protein CoiA family protein -
  AADZ70_RS01390 (AADZ70_01390) pepF 255095..256924 (+) 1830 WP_099745180.1 oligoendopeptidase F Regulator
  AADZ70_RS01395 (AADZ70_01395) - 256959..257126 (-) 168 WP_016938224.1 hypothetical protein -
  AADZ70_RS01400 (AADZ70_01400) spxH 257411..258313 (-) 903 WP_099745140.1 protease adaptor protein SpxH -
  AADZ70_RS01405 (AADZ70_01405) - 258310..258708 (-) 399 WP_016938222.1 thiol management oxidoreductase -
  AADZ70_RS01410 (AADZ70_01410) - 258933..259619 (-) 687 WP_342007585.1 lytic transglycosylase domain-containing protein -
  AADZ70_RS01415 (AADZ70_01415) - 259624..260199 (-) 576 WP_342007586.1 CYTH domain-containing protein -
  AADZ70_RS01420 (AADZ70_01420) - 260324..260689 (+) 366 WP_095240942.1 hypothetical protein -
  AADZ70_RS01425 (AADZ70_01425) - 260717..261352 (+) 636 WP_016938218.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 69773.52 Da        Isoelectric Point: 5.4412

>NTDB_id=979665 AADZ70_RS01390 WP_099745180.1 255095..256924(+) (pepF) [Bacillus sp. YBsi01]
MTEENKAAQLPDRSEVKAEHTWRLEDIFPSDEAWNKEFQAVKELIPNLSSFKGTLAHSADNLYAALTAQDEVTSRLGKLY
AYAHMRSDQDTGNSFYQGLNDKAASLYSQAASATAYIEPEILAIQEDKLHQFILEKEELKLYSHAIEEITKQRPHVLSER
EEALLAEASEALSSPSNTFSVLNNADITFPSIKDEDGKETQITHGNFINFLESSDREVRKNAFKAVYKTYGQYKNTMATT
LSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLIKTINKHLPLLHRYIDLRKKVLGLDEVHIYDLYTPLVKDSGM
KVTYEEAKDYMLKGLAPLGEEYASILKEGLENRWVDVYENKGKRSGAYSSGTYGTNPYILMNWHDNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYMLNSLKDEKQRLYLLNHMLEGFRGTVFRQTMFAEFEHLIHTKAQ
EGEPLTPELLSKLYYDLNKKYFGDNMVIDKEISLEWSRIPHFYYNYYVYQYATGYSAAQALSSQILKEGKPAVERYTEFL
KAGSSEYPIDILKKAGVDMTSPEPIEAACKMFEEKLNEMEELLSKVNPS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=979665 AADZ70_RS01390 WP_099745180.1 255095..256924(+) (pepF) [Bacillus sp. YBsi01]
ATGACTGAGGAAAATAAAGCAGCACAGCTGCCTGACAGAAGTGAAGTAAAGGCAGAGCATACATGGAGACTAGAGGATAT
TTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAAGCGGTTAAAGAATTAATTCCGAATTTATCTTCCTTTAAAGGCA
CGCTTGCTCATTCAGCCGATAATTTATACGCGGCGCTTACCGCACAGGATGAAGTGACGAGCCGTTTGGGGAAACTTTAT
GCATACGCGCATATGCGTTCAGACCAGGATACGGGAAATTCTTTCTACCAAGGGCTGAACGACAAAGCCGCAAGTCTGTA
TTCTCAGGCTGCCAGTGCGACTGCTTATATTGAACCGGAAATTCTGGCGATTCAGGAGGACAAGCTGCATCAGTTTATTC
TGGAAAAAGAAGAGCTGAAGCTTTACTCCCATGCAATTGAAGAAATTACAAAACAGCGTCCGCACGTGCTGAGTGAAAGA
GAAGAGGCCCTGCTTGCGGAAGCGTCAGAAGCGCTGTCTTCGCCTTCCAACACATTCAGTGTGTTAAATAACGCCGATAT
TACGTTTCCGTCAATTAAAGATGAAGACGGCAAGGAAACTCAAATCACACACGGCAACTTTATTAATTTTCTGGAAAGCA
GCGACCGGGAAGTCCGTAAAAACGCCTTTAAAGCCGTATATAAAACATACGGACAGTATAAAAACACGATGGCGACTACA
CTCAGCGGCACTGTGAAAAAAGACAATTTTTACGCCCGCGTGAAAAAATACAAATCAGCACGGGAAGCGGCTTTATCCAA
TAACAGCATCCCTGAAGAAGTTTATGATAACCTGATCAAAACGATCAATAAACACCTTCCGTTATTACACCGTTACATTG
ATTTGCGGAAAAAGGTGCTCGGCCTTGATGAAGTCCATATTTATGACCTGTACACACCGCTTGTAAAAGATTCGGGAATG
AAGGTCACATATGAGGAAGCAAAAGATTATATGCTCAAAGGGCTTGCTCCGTTAGGCGAGGAATACGCGTCTATTTTAAA
AGAAGGACTTGAAAACCGCTGGGTCGATGTATACGAAAACAAAGGAAAACGCAGCGGTGCTTATTCGTCCGGTACATACG
GCACGAATCCGTACATCTTGATGAACTGGCATGACAATGTCAACAATCTGTTTACGCTCGTTCACGAGTTCGGCCATTCC
GTGCACAGCTACTATACGAGAAAATATCAGCCGTATCCGTACGGAAACTACAGCATTTTTGTCGCTGAAGTCGCTTCTAC
GACCAATGAAGCGCTGCTTGGTGAATATATGCTGAACAGCTTAAAAGATGAAAAACAGCGTTTGTACCTGCTCAACCACA
TGCTTGAAGGTTTCAGAGGCACAGTCTTCAGACAGACGATGTTCGCTGAATTTGAGCATCTGATTCATACGAAAGCGCAA
GAAGGCGAGCCGCTGACGCCTGAACTGCTGAGCAAGCTTTATTATGATCTCAATAAAAAGTATTTCGGAGACAACATGGT
GATTGATAAAGAAATCAGCCTGGAATGGTCAAGAATTCCGCATTTCTATTACAATTATTATGTGTATCAATATGCGACAG
GCTACAGTGCGGCCCAAGCGCTGAGCAGCCAGATCTTAAAAGAAGGCAAGCCTGCGGTTGAGCGTTATACCGAATTCTTA
AAAGCGGGAAGCTCAGAATACCCGATCGACATACTGAAAAAAGCGGGAGTCGATATGACATCGCCTGAACCGATCGAGGC
GGCCTGTAAAATGTTTGAAGAGAAACTGAATGAAATGGAAGAACTCCTTTCGAAAGTGAACCCTTCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50

97.537

0.488

Multiple sequence alignment