Detailed information NTG0979482

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACNHKQ_RS01230
• Genome accession: NZ_CP182139
• Coordinates: 243542..244567 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUWW06
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 238542..249567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNHKQ_RS01205 (ACNHKQ_01205)	rraA	238956..239441 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACNHKQ_RS01210 (ACNHKQ_01210)	menA	239534..240460 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACNHKQ_RS01215 (ACNHKQ_01215)	hslU	240527..241858 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACNHKQ_RS01220 (ACNHKQ_01220)	hslV	241868..242398 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACNHKQ_RS01225 (ACNHKQ_01225)	ftsN	242491..243450 (-)	960	WP_000068837.1	cell division protein FtsN	-
ACNHKQ_RS01230 (ACNHKQ_01230)	cytR	243542..244567 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACNHKQ_RS01235 (ACNHKQ_01235)	priA	244723..246921 (-)	2199	WP_032281956.1	primosomal protein N'	Machinery gene
ACNHKQ_RS01240 (ACNHKQ_01240)	rpmE	247124..247336 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACNHKQ_RS01245 (ACNHKQ_01245)	yiiX	247397..248005 (-)	609	WP_000877403.1	YiiX family permuted papain-like enzyme	-
ACNHKQ_RS01250 (ACNHKQ_01250)	metJ	248189..248506 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=979482 ACNHKQ_RS01230 WP_000644904.1 243542..244567(-) (cytR) [Escherichia coli strain CUWW06]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=979482 ACNHKQ_RS01230 WP_000644904.1 243542..244567(-) (cytR) [Escherichia coli strain CUWW06]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTAGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCACTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628