Detailed information NTG0097940

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: R8566_RS02920
• Genome accession: NZ_AP026920
• Coordinates: 574211..574477 (+)
• Length: 88 a.a.
• NCBI ID: WP_001811621.1
• Uniprot ID: A0AAP5J8I9
• Organism: Streptococcus pneumoniae strain PZ900700014
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	573638..574132	574211..574477	flank	79

Gene organization within MGE regions

Location: 573638..574477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8566_RS02915 (PC0014_05810)	-	573638..574126 (+)	489	Protein_575	transposase	-
R8566_RS02920 (PC0014_05820)	HI0659	574211..574477 (+)	267	WP_001811621.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9560.13 Da
• Isoelectric Point: 4.8274

>NTDB_id=97940 R8566_RS02920 WP_001811621.1 574211..574477(+) (HI0659) [Streptococcus pneumoniae strain PZ900700014]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=97940 R8566_RS02920 WP_001811621.1 574211..574477(+) (HI0659) [Streptococcus pneumoniae strain PZ900700014]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	61.039	87.5	0.534