Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACLQ7P_RS19515 Genome accession   NZ_CP181322
Coordinates   3653896..3654609 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3648896..3659609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS19495 (ACLQ7P_19495) ghrB 3649051..3650028 (+) 978 WP_072592561.1 2-hydroxyacid dehydrogenase -
  ACLQ7P_RS19500 (ACLQ7P_19500) psdB 3650065..3652005 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  ACLQ7P_RS19505 (ACLQ7P_19505) psdA 3651980..3652759 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ACLQ7P_RS19510 (ACLQ7P_19510) psdS 3652842..3653902 (-) 1061 Protein_3784 two-component sensor histidine kinase PsdS -
  ACLQ7P_RS19515 (ACLQ7P_19515) braR 3653896..3654609 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  ACLQ7P_RS19520 (ACLQ7P_19520) - 3654756..3654964 (+) 209 Protein_3786 hypothetical protein -
  ACLQ7P_RS19525 (ACLQ7P_19525) yvcN 3655000..3655764 (-) 765 WP_015251150.1 arylamine N-acetyltransferase family protein -
  ACLQ7P_RS19530 (ACLQ7P_19530) crh 3655765..3656022 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ACLQ7P_RS19535 (ACLQ7P_19535) whiA 3656046..3656996 (-) 951 WP_326122506.1 DNA-binding protein WhiA -
  ACLQ7P_RS19540 (ACLQ7P_19540) mgfK 3657019..3657972 (-) 954 WP_326122508.1 gluconeogenesis morphogenetic factor -
  ACLQ7P_RS19545 (ACLQ7P_19545) rapZ 3657974..3658861 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ACLQ7P_RS19550 (ACLQ7P_19550) rppI 3658886..3659362 (-) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=979289 ACLQ7P_RS19515 WP_014481000.1 3653896..3654609(-) (braR) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=979289 ACLQ7P_RS19515 WP_014481000.1 3653896..3654609(-) (braR) [Bacillus subtilis subsp. subtilis strain JCK-1398]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435