Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLQ7P_RS16400 Genome accession   NZ_CP181322
Coordinates   3073538..3074248 (-) Length   236 a.a.
NCBI ID   WP_015714539.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3068538..3079248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS16385 (ACLQ7P_16385) pepV 3069559..3070950 (-) 1392 WP_041054018.1 dipeptidase PepV -
  ACLQ7P_RS16390 (ACLQ7P_16390) pbuO 3071047..3072345 (+) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  ACLQ7P_RS16395 (ACLQ7P_16395) ythQ 3072384..3073541 (-) 1158 WP_041054022.1 ABC transporter permease -
  ACLQ7P_RS16400 (ACLQ7P_16400) pptA 3073538..3074248 (-) 711 WP_015714539.1 ABC transporter ATP-binding protein Regulator
  ACLQ7P_RS16405 (ACLQ7P_16405) ytzE 3074538..3074759 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  ACLQ7P_RS16410 (ACLQ7P_16410) rsuA 3074880..3075599 (-) 720 WP_416247093.1 pseudouridine synthase -
  ACLQ7P_RS16415 (ACLQ7P_16415) murJ 3075668..3077302 (-) 1635 WP_014480588.1 lipid II flippase MurJ -
  ACLQ7P_RS16420 (ACLQ7P_16420) ytfP 3077505..3078767 (+) 1263 WP_072557170.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26573.65 Da        Isoelectric Point: 5.5930

>NTDB_id=979277 ACLQ7P_RS16400 WP_015714539.1 3073538..3074248(-) (pptA) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRP

Nucleotide


Download         Length: 711 bp        

>NTDB_id=979277 ACLQ7P_RS16400 WP_015714539.1 3073538..3074248(-) (pptA) [Bacillus subtilis subsp. subtilis strain JCK-1398]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGAGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTTGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432