Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACLQ7P_RS14545 Genome accession   NZ_CP181322
Coordinates   2705526..2706101 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2700526..2711101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS14525 (ACLQ7P_14525) moeB 2701423..2702442 (-) 1020 WP_121591748.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACLQ7P_RS14530 (ACLQ7P_14530) mobA 2702493..2703092 (-) 600 WP_416247063.1 molybdenum cofactor guanylyltransferase -
  ACLQ7P_RS14535 (ACLQ7P_14535) cse15 2703229..2704194 (+) 966 WP_121591747.1 spore protein Cse15 -
  ACLQ7P_RS14545 (ACLQ7P_14545) rok 2705526..2706101 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ACLQ7P_RS14550 (ACLQ7P_14550) ykuV 2706537..2706983 (-) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  ACLQ7P_RS14555 (ACLQ7P_14555) ahpA 2707053..2707595 (-) 543 WP_041334143.1 biofilm-specific peroxidase AhpA -
  ACLQ7P_RS14560 (ACLQ7P_14560) mscT 2707832..2708635 (+) 804 WP_017697281.1 small-conductance mechanosensitive channel protein MscT -
  ACLQ7P_RS14565 (ACLQ7P_14565) ykuS 2708672..2708917 (-) 246 WP_003232382.1 YkuS family protein -
  ACLQ7P_RS14570 (ACLQ7P_14570) dapI 2708979..2710103 (-) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  ACLQ7P_RS14575 (ACLQ7P_14575) dapD 2710173..2710883 (-) 711 WP_416247064.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=979260 ACLQ7P_RS14545 WP_003232378.1 2705526..2706101(-) (rok) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=979260 ACLQ7P_RS14545 WP_003232378.1 2705526..2706101(-) (rok) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1