Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ACLQ7P_RS06485 Genome accession   NZ_CP181322
Coordinates   1290160..1292013 (+) Length   617 a.a.
NCBI ID   WP_326043354.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1285160..1297013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS06450 (ACLQ7P_06450) yjbC 1285620..1286198 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACLQ7P_RS06455 (ACLQ7P_06455) spx 1286379..1286774 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACLQ7P_RS06460 (ACLQ7P_06460) yjbE 1287029..1287685 (-) 657 WP_014479447.1 TerC family protein -
  ACLQ7P_RS06465 (ACLQ7P_06465) - 1287855..1287995 (+) 141 WP_119122854.1 hypothetical protein -
  ACLQ7P_RS06470 (ACLQ7P_06470) mecA 1287962..1288618 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  ACLQ7P_RS06475 (ACLQ7P_06475) - 1288613..1288735 (-) 123 WP_021479547.1 hypothetical protein -
  ACLQ7P_RS06480 (ACLQ7P_06480) coiA 1288809..1289930 (+) 1122 WP_235091746.1 competence protein CoiA Machinery gene
  ACLQ7P_RS06485 (ACLQ7P_06485) pepF 1290160..1292013 (+) 1854 WP_326043354.1 oligoendopeptidase F Regulator
  ACLQ7P_RS06490 (ACLQ7P_06490) - 1292027..1292194 (-) 168 WP_003244944.1 hypothetical protein -
  ACLQ7P_RS06495 (ACLQ7P_06495) spxH 1292508..1293407 (-) 900 WP_308153880.1 protease adaptor protein SpxH -
  ACLQ7P_RS06500 (ACLQ7P_06500) bhbI 1293404..1293802 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACLQ7P_RS06505 (ACLQ7P_06505) cwlQ 1294057..1294791 (-) 735 WP_250621958.1 bifunctional muramidase/murein lytic transglycosylase -
  ACLQ7P_RS06510 (ACLQ7P_06510) yjbK 1294806..1295378 (-) 573 WP_015252351.1 CYTH domain-containing protein -
  ACLQ7P_RS06515 (ACLQ7P_06515) - 1295503..1295871 (+) 369 WP_024573346.1 hypothetical protein -
  ACLQ7P_RS06520 (ACLQ7P_06520) yjbM 1295900..1296535 (+) 636 WP_003245294.1 GTP diphosphokinase -

Sequence

Protein


Download         Length: 617 a.a.        Molecular weight: 71038.12 Da        Isoelectric Point: 5.4644

>NTDB_id=979210 ACLQ7P_RS06485 WP_326043354.1 1290160..1292013(+) (pepF) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MAEEKKANQLPDRSEVKAEDTWRLEDIFPSDEAWNKEFQAVKELIPNLSKYKGKLADSADHLYEALTYQDKVMERLGRLY
TYAHMRSDQDTGNSFYQGLNDKAGNLYTQAASATAYLVPEILSIEEDKLQQFILEKEELKLYSHAIEEITKERPHVLSEK
EEALLAEASEVLGSSSNTFSVLNNADITFPSIKDEDGNEKQITHGNFINFLESENREVRKNAFDAVYKTYGQYKNTMATT
LSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLVKTINKHLPLLHRYIALRKKVLELDEVHIYDLYTPLVKDAGM
KVTYEEAKDYMLKGLAPLGEEYASILKEGLENRWVDVYENKGKRNGAYSSGAYGTNPYILMNWHNNVNNLFTLVHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNNLEDEKQRLYILNHMLEGFRGTVFRQTMFAEFEHLIHTKAQ
EGEPLTPELLTNVYYDLNKKYFGDGMVIDKEIGLEWSRIPHFYYNYYVYQYATGYSAAQALSSQILKEGKPAVDRYIDFL
KAGSSQYPIDVLKKAGVDMTSPEPIEAACKMFEEKLDEMEELLMKVKQSQKSKPVRK

Nucleotide


Download         Length: 1854 bp        

>NTDB_id=979210 ACLQ7P_RS06485 WP_326043354.1 1290160..1292013(+) (pepF) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGGCTGAGGAAAAAAAAGCAAACCAACTGCCTGACAGAAGTGAGGTAAAGGCAGAAGACACATGGAGACTTGAGGATAT
TTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAAGCTGTAAAAGAATTAATTCCGAATTTATCTAAGTATAAAGGAA
AGCTGGCAGATTCAGCTGATCATTTATACGAGGCTCTTACGTATCAAGATAAAGTGATGGAGCGGCTGGGTAGGCTGTAC
ACATATGCGCATATGCGCTCTGACCAGGATACTGGGAACTCCTTTTACCAGGGGCTGAATGACAAGGCGGGAAACCTGTA
TACACAGGCTGCAAGCGCGACAGCTTATTTGGTTCCGGAGATTTTATCCATAGAAGAAGACAAACTGCAGCAGTTCATTC
TTGAAAAAGAAGAATTAAAGCTGTACTCTCATGCGATTGAGGAGATTACAAAGGAACGTCCGCATGTGCTGAGCGAGAAG
GAAGAGGCACTGCTTGCTGAAGCCTCCGAGGTACTGGGGTCATCTTCAAATACATTCAGCGTGTTAAATAACGCAGATAT
AACGTTTCCATCCATTAAAGACGAAGATGGGAATGAAAAACAGATCACTCACGGCAACTTTATTAATTTCTTGGAAAGTG
AAAACCGTGAAGTCCGCAAAAATGCGTTTGACGCAGTGTATAAAACGTACGGACAATATAAAAACACAATGGCCACGACG
CTAAGCGGCACTGTGAAAAAGGACAACTTCTACGCGAGAGTGAAAAAGTACAAGTCCGCGCGTGAGGCTGCGCTTTCTAA
CAACAGTATTCCTGAGGAAGTATACGATAACCTTGTTAAGACGATTAATAAGCATTTGCCGCTCCTGCACCGCTATATTG
CGCTAAGAAAGAAAGTGCTTGAGCTTGATGAAGTGCATATCTATGACCTGTATACACCGCTTGTGAAAGATGCTGGGATG
AAGGTGACATACGAGGAAGCCAAAGATTACATGCTGAAAGGCCTCGCACCTTTAGGGGAAGAATATGCCTCTATCCTAAA
AGAAGGACTGGAAAACCGCTGGGTGGACGTTTACGAAAATAAAGGCAAACGCAATGGGGCTTATTCATCAGGAGCTTACG
GCACGAATCCGTATATTTTGATGAACTGGCATAATAACGTCAATAATCTCTTTACGCTTGTGCACGAGTTTGGACATTCC
GTACACAGCTACTATACGAGAAAGCACCAGCCTTATCCATACGGCAATTACAGCATCTTTGTCGCGGAAGTTGCCTCTAC
GACAAATGAAGCGCTCCTTGGCGAATATTTGCTGAACAATTTAGAGGATGAAAAACAGCGCTTATATATTCTCAACCATA
TGCTTGAGGGCTTCAGGGGAACGGTTTTCAGACAAACGATGTTCGCTGAATTTGAACATCTGATTCATACAAAGGCGCAA
GAAGGCGAGCCGCTTACACCTGAGCTTCTGACAAATGTCTATTACGACCTGAATAAAAAGTATTTTGGCGACGGCATGGT
GATTGATAAGGAAATCGGCCTAGAATGGTCGCGTATTCCGCACTTCTATTACAATTACTATGTGTATCAGTATGCGACAG
GGTACAGCGCTGCCCAAGCATTAAGCAGCCAGATTTTGAAGGAAGGAAAGCCGGCGGTTGACCGTTATATTGACTTCCTG
AAAGCGGGAAGCTCACAATACCCGATTGATGTCCTGAAAAAAGCGGGTGTTGATATGACGTCTCCAGAGCCAATCGAAGC
CGCGTGCAAAATGTTTGAAGAAAAACTTGATGAAATGGAAGAGCTGCTGATGAAAGTCAAGCAGTCTCAAAAAAGTAAGC
CTGTGCGGAAATGA

Domains

Predicted by InterProScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

48.822

96.272

0.47

Multiple sequence alignment