Detailed information    

insolico Bioinformatically predicted

Overview


Name   rapC   Type   Regulator
Locus tag   ACLQ7P_RS02835 Genome accession   NZ_CP181322
Coordinates   535340..536515 (+) Length   391 a.a.
NCBI ID   WP_043858076.1    Uniprot ID   A0A0T6BW95
Organism   Bacillus subtilis subsp. subtilis strain JCK-1398     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 530340..541515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLQ7P_RS02810 (ACLQ7P_02810) - 530399..530725 (+) 327 WP_014662881.1 YddF family protein -
  ACLQ7P_RS02815 (ACLQ7P_02815) conG 530729..533176 (+) 2448 WP_082248665.1 CD3337/EF1877 family mobilome membrane protein -
  ACLQ7P_RS02820 (ACLQ7P_02820) cwlT 533173..534162 (+) 990 WP_043858079.1 bifunctional lytic transglycosylase/C40 family peptidase -
  ACLQ7P_RS02825 (ACLQ7P_02825) - 534177..534683 (+) 507 WP_043858078.1 hypothetical protein -
  ACLQ7P_RS02830 (ACLQ7P_02830) - 534746..535123 (+) 378 WP_129093872.1 cystatin-like fold lipoprotein -
  ACLQ7P_RS02835 (ACLQ7P_02835) rapC 535340..536515 (+) 1176 WP_043858076.1 response regulator aspartate phosphatase RapI Regulator
  ACLQ7P_RS02840 (ACLQ7P_02840) phrI 536472..536591 (+) 120 WP_082248664.1 phosphatase -
  ACLQ7P_RS02845 (ACLQ7P_02845) - 536678..537820 (+) 1143 WP_057957497.1 FRG domain-containing protein -
  ACLQ7P_RS02850 (ACLQ7P_02850) - 538219..538782 (-) 564 WP_017696997.1 GNAT family N-acetyltransferase -
  ACLQ7P_RS02855 (ACLQ7P_02855) - 538973..539497 (-) 525 WP_121591447.1 hypothetical protein -
  ACLQ7P_RS02860 (ACLQ7P_02860) - 540057..541304 (+) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -

Sequence


Protein


Download         Length: 391 a.a.        Molecular weight: 46571.99 Da        Isoelectric Point: 5.0238

>NTDB_id=979183 ACLQ7P_RS02835 WP_043858076.1 535340..536515(+) (rapC) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MRGVFLDKDKIPYDIVTKKLNEWYTSIKNDQVEQAEIIKTEVEKELLNMEENQDALLYYQLLDFRHEIMLSYMNSKEIED
LHNAYETIKEIEKQGQLTGMLEYYFYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTVRCQFIVAGNLIDSLEYERALEQFLNSLEIAKESNIDHLIAMSHMNIGICYDELKEY
KKASQHLILALEIFEKSKHSFLTKTLFTLTYVEAKQQNYDVALTYFRKGRFIADKSDDKEYSAKFKILEGLFFSDGENQL
IKNAFSYLTSRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIINENQPDSIGSSHFK

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=979183 ACLQ7P_RS02835 WP_043858076.1 535340..536515(+) (rapC) [Bacillus subtilis subsp. subtilis strain JCK-1398]
TTGCGGGGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACATAGTCACAAAAAAGTTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAGCAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTGCTAAATATGGAAGAAAACCAAG
ATGCCTTGTTATATTATCAGCTATTAGATTTTAGACATGAGATAATGCTGAGTTATATGAATTCTAAGGAAATAGAAGAT
CTCCATAATGCTTATGAAACTATAAAAGAAATTGAGAAGCAAGGGCAATTAACTGGCATGTTGGAATACTATTTTTACTT
TTTTAAGGGTATGTACGAGTTTAGACGTAAAGAATTAACTACAGCAATAAGTGCCTATCGAATAGCAGAATCAAAGTTGT
CTGAAGTTGAGGATGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTATATTATTATATGAAACAAACATAC
TTCTCTATGAATTATGCAAATCGTGCACTCAAAATATTTAGAGAGTATGAAGAGTATGCTGTCCAGACTGTGCGTTGTCA
ATTTATTGTAGCAGGAAACTTGATCGATTCTTTAGAATATGAAAGAGCTTTGGAGCAATTTTTGAATTCTTTGGAAATCG
CCAAGGAAAGTAATATAGATCATTTAATTGCAATGTCACACATGAATATTGGAATTTGTTATGATGAATTGAAAGAATAT
AAAAAGGCTTCACAACATTTAATCTTGGCTTTAGAAATTTTTGAAAAATCAAAACATAGTTTCCTAACAAAGACTTTATT
CACTTTAACCTACGTTGAAGCAAAACAACAAAATTATGATGTTGCTTTGACATACTTTAGGAAAGGTCGATTTATTGCCG
ATAAAAGTGATGATAAGGAATACTCAGCGAAATTCAAAATATTAGAGGGATTATTTTTTTCTGATGGTGAGAATCAATTA
ATAAAGAATGCATTTTCATATCTAACTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCGATTGAAGTCGCTGATTA
TTTTCATGAACAAGGAAATTTAATGCTCTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGAAAAATTAAAAAAG
GGGAGATTATTAATGAAAATCAGCCGGATTCTATTGGCAGCAGTCATTTTAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0T6BW95

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

37.701

95.652

0.361


Multiple sequence alignment