Detailed information NTG0979153

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: WA044_RS17655
• Genome accession: NZ_CP151554
• Coordinates: 3554016..3555161 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain E69
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3549016..3560161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WA044_RS17635 (WA044_17635)	-	3549490..3550206 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
WA044_RS17640 (WA044_17640)	narK	3550304..3551494 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
WA044_RS17645 (WA044_17645)	argS	3551629..3553299 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
WA044_RS17650 (WA044_17650)	-	3553296..3553724 (-)	429	WP_003151069.1	DUF1934 family protein	-
WA044_RS17655 (WA044_17655)	rapF	3554016..3555161 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
WA044_RS17660 (WA044_17660)	-	3555145..3555264 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
WA044_RS17665 (WA044_17665)	speB	3555387..3556259 (-)	873	WP_058906421.1	agmatinase	-
WA044_RS17670 (WA044_17670)	speE	3556319..3557149 (-)	831	WP_003151052.1	spermidine synthase	-
WA044_RS17675 (WA044_17675)	-	3557349..3559421 (+)	2073	WP_058906422.1	transglycosylase domain-containing protein	-
WA044_RS17680 (WA044_17680)	-	3559445..3559876 (-)	432	WP_043867516.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=979153 WA044_RS17655 WP_017418708.1 3554016..3555161(+) (rapF) [Bacillus velezensis strain E69]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=979153 WA044_RS17655 WP_017418708.1 3554016..3555161(+) (rapF) [Bacillus velezensis strain E69]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533