Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACM6AR_RS09730 Genome accession   NZ_CP181164
Coordinates   1960609..1961349 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0620     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1955609..1966349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AR_RS09705 (ACM6AR_09705) hemH 1956485..1957408 (-) 924 WP_416197020.1 ferrochelatase -
  ACM6AR_RS09710 (ACM6AR_09710) hemE 1957466..1958503 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  ACM6AR_RS09715 (ACM6AR_09715) - 1958493..1958603 (-) 111 WP_001790154.1 hypothetical protein -
  ACM6AR_RS09720 (ACM6AR_09720) traP 1958766..1959269 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  ACM6AR_RS09725 (ACM6AR_09725) ecsB 1959393..1960616 (-) 1224 WP_000551839.1 ABC transporter permease EcsB -
  ACM6AR_RS09730 (ACM6AR_09730) pptA 1960609..1961349 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACM6AR_RS09735 (ACM6AR_09735) - 1961483..1961905 (+) 423 WP_000004986.1 HIT family protein -
  ACM6AR_RS09740 (ACM6AR_09740) - 1962047..1962412 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  ACM6AR_RS09745 (ACM6AR_09745) - 1963145..1963702 (+) 558 WP_000477960.1 DUF3267 domain-containing protein -
  ACM6AR_RS09750 (ACM6AR_09750) - 1963907..1964869 (+) 963 WP_000782121.1 foldase protein PrsA -
  ACM6AR_RS09755 (ACM6AR_09755) yhaM 1964990..1965931 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=979071 ACM6AR_RS09730 WP_000216874.1 1960609..1961349(-) (pptA) [Staphylococcus aureus strain AG21-0620]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=979071 ACM6AR_RS09730 WP_000216874.1 1960609..1961349(-) (pptA) [Staphylococcus aureus strain AG21-0620]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGACTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment