Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AAEO79_RS07010 Genome accession   NZ_CP151540
Coordinates   1425962..1427005 (-) Length   347 a.a.
NCBI ID   WP_071861424.1    Uniprot ID   A0A1L8SYJ2
Organism   Enterococcus devriesei strain Ed-CK-24     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1420962..1432005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEO79_RS06990 (AAEO79_06980) holA 1421358..1422386 (-) 1029 WP_379945520.1 DNA polymerase III subunit delta -
  AAEO79_RS06995 (AAEO79_06985) - 1422526..1424733 (-) 2208 WP_379945521.1 DNA internalization-related competence protein ComEC/Rec2 -
  AAEO79_RS07000 (AAEO79_06990) - 1424751..1425242 (-) 492 WP_071861422.1 ComE operon protein 2 -
  AAEO79_RS07005 (AAEO79_06995) - 1425271..1425885 (-) 615 WP_379945522.1 helix-hairpin-helix domain-containing protein -
  AAEO79_RS07010 (AAEO79_07000) sepM 1425962..1427005 (-) 1044 WP_071861424.1 SepM family pheromone-processing serine protease Regulator
  AAEO79_RS07015 (AAEO79_07005) coaD 1427005..1427496 (-) 492 WP_071861425.1 pantetheine-phosphate adenylyltransferase -
  AAEO79_RS07020 (AAEO79_07010) rsmD 1427496..1428053 (-) 558 WP_216429108.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AAEO79_RS07025 (AAEO79_07015) - 1428151..1428498 (-) 348 WP_174784454.1 YlbG family protein -
  AAEO79_RS07030 (AAEO79_07020) - 1428485..1428910 (-) 426 WP_216429106.1 YlbF family regulator -
  AAEO79_RS07035 (AAEO79_07025) - 1428912..1430021 (-) 1110 WP_379945523.1 CAP-associated domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 37942.52 Da        Isoelectric Point: 6.3746

>NTDB_id=979030 AAEO79_RS07010 WP_071861424.1 1425962..1427005(-) (sepM) [Enterococcus devriesei strain Ed-CK-24]
MKNNKLVKRLVAIFLALVVIACVIVPIPYYIEEPGDTINLKELITVNGKEDEHKGSFSLTSVGIRRATVFTALKSKVEPF
HEIISADDLTGGASDAEYMQIQKFNMETSQNFAIEQALKLADKPYEMTYKGVYVLGVEKNSNFADKISVGDTVTKADGKT
FTSSEDFMKYVKSQKVGQEMKVTYVHDGKTKEATEKLIKLPTDKKPGIGITLTDHTEIDSQDKVKVDAGNIGGPSAGLMF
TLEIYEQLTGKDLRHGEKIAGTGTISPDGEVGRIGGIDKKVASAAASDNKIFFAPNDEITKEMEKAQPGIKSNYEEAKAA
AKKLDTDMKIVPVKTVQDALDYLAKMK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=979030 AAEO79_RS07010 WP_071861424.1 1425962..1427005(-) (sepM) [Enterococcus devriesei strain Ed-CK-24]
GTGAAAAACAATAAATTAGTCAAACGTCTAGTAGCAATATTTTTAGCATTGGTAGTAATTGCCTGCGTAATCGTGCCGAT
TCCTTATTATATCGAGGAGCCGGGAGACACGATCAATTTGAAGGAATTGATTACTGTCAACGGCAAAGAAGATGAACATA
AAGGCTCCTTCAGCCTGACTTCGGTGGGAATTCGCCGAGCAACGGTCTTTACGGCCTTGAAGTCAAAAGTTGAACCCTTC
CATGAAATTATTTCGGCTGATGATTTAACCGGCGGGGCCAGCGACGCAGAATATATGCAGATCCAGAAATTCAATATGGA
GACTTCACAAAATTTTGCCATCGAACAAGCGTTGAAATTAGCAGATAAACCTTATGAAATGACCTATAAAGGTGTTTATG
TGTTAGGCGTTGAAAAAAATTCTAATTTCGCAGATAAAATTAGTGTTGGCGATACCGTTACTAAAGCAGATGGAAAAACC
TTTACTAGCAGCGAAGATTTCATGAAATATGTGAAATCGCAAAAGGTTGGACAAGAAATGAAAGTAACCTATGTCCATGA
CGGTAAAACCAAGGAAGCTACAGAAAAATTGATCAAGCTGCCGACGGATAAGAAGCCTGGTATCGGGATCACCTTGACGG
ATCATACCGAGATCGACTCACAGGACAAGGTCAAAGTTGACGCTGGCAATATTGGCGGTCCATCTGCTGGGTTAATGTTC
ACGTTGGAAATCTATGAACAATTGACTGGAAAAGATCTACGTCATGGCGAGAAAATCGCTGGAACTGGTACGATCAGCCC
AGATGGAGAAGTTGGACGAATCGGCGGGATCGATAAAAAAGTTGCCAGTGCAGCAGCCAGCGACAATAAAATTTTCTTTG
CTCCTAACGACGAAATCACGAAAGAAATGGAAAAAGCGCAGCCAGGCATCAAATCAAATTACGAAGAAGCCAAGGCAGCG
GCTAAGAAGCTAGATACCGACATGAAGATTGTGCCTGTTAAAACAGTGCAAGATGCTTTGGATTATTTAGCGAAAATGAA
ATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L8SYJ2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

50

99.712

0.499


Multiple sequence alignment