Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACM6AP_RS06375 Genome accession   NZ_CP181151
Coordinates   1315725..1316876 (+) Length   383 a.a.
NCBI ID   WP_416152269.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0618     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1310725..1321876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AP_RS06350 (ACM6AP_06350) yfmH 1311556..1312842 (+) 1287 WP_416152268.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  ACM6AP_RS06355 (ACM6AP_06355) ymfI 1312842..1313546 (+) 705 WP_000646228.1 elongation factor P 5-aminopentanone reductase -
  ACM6AP_RS06360 (ACM6AP_06360) - 1313651..1314478 (+) 828 WP_000214890.1 YmfK family protein -
  ACM6AP_RS06365 (ACM6AP_06365) - 1314497..1314889 (+) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ACM6AP_RS06370 (ACM6AP_06370) pgsA 1314923..1315501 (+) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACM6AP_RS06375 (ACM6AP_06375) cinA 1315725..1316876 (+) 1152 WP_416152269.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACM6AP_RS06380 (ACM6AP_06380) recA 1317041..1318084 (+) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ACM6AP_RS06385 (ACM6AP_06385) rny 1318438..1319997 (+) 1560 WP_001050913.1 ribonuclease Y -
  ACM6AP_RS06390 (ACM6AP_06390) - 1320294..1320509 (-) 216 WP_000026308.1 hypothetical protein -
  ACM6AP_RS06395 (ACM6AP_06395) - 1320683..1321480 (+) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43281.62 Da        Isoelectric Point: 6.1914

>NTDB_id=978775 ACM6AP_RS06375 WP_416152269.1 1315725..1316876(+) (cinA) [Staphylococcus aureus strain AG21-0618]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMALGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYVLIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=978775 ACM6AP_RS06375 WP_416152269.1 1315725..1316876(+) (cinA) [Staphylococcus aureus strain AG21-0618]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCTAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGTGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431


Multiple sequence alignment