Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACM6AC_RS09100 Genome accession   NZ_CP181150
Coordinates   1882975..1883715 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0600     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1877975..1888715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AC_RS09075 (ACM6AC_09075) hemH 1878852..1879775 (-) 924 WP_000162881.1 ferrochelatase -
  ACM6AC_RS09080 (ACM6AC_09080) hemE 1879833..1880870 (-) 1038 WP_154284365.1 uroporphyrinogen decarboxylase -
  ACM6AC_RS09085 (ACM6AC_09085) - 1880860..1880946 (-) 87 WP_031875110.1 hypothetical protein -
  ACM6AC_RS09090 (ACM6AC_09090) traP 1881132..1881635 (+) 504 WP_154284366.1 signal transduction protein TRAP -
  ACM6AC_RS09095 (ACM6AC_09095) ecsB 1881759..1882982 (-) 1224 WP_154284367.1 ABC transporter permease EcsB -
  ACM6AC_RS09100 (ACM6AC_09100) pptA 1882975..1883715 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACM6AC_RS09105 (ACM6AC_09105) - 1883849..1884271 (+) 423 WP_000004981.1 HIT family protein -
  ACM6AC_RS09110 (ACM6AC_09110) - 1884413..1884778 (+) 366 WP_154284368.1 YtxH domain-containing protein -
  ACM6AC_RS09115 (ACM6AC_09115) - 1885508..1886065 (+) 558 WP_000477954.1 DUF3267 domain-containing protein -
  ACM6AC_RS09120 (ACM6AC_09120) - 1886270..1887232 (+) 963 WP_000782119.1 foldase protein PrsA -
  ACM6AC_RS09125 (ACM6AC_09125) yhaM 1887353..1888294 (-) 942 WP_262633888.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=978718 ACM6AC_RS09100 WP_000216874.1 1882975..1883715(-) (pptA) [Staphylococcus aureus strain AG21-0600]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=978718 ACM6AC_RS09100 WP_000216874.1 1882975..1883715(-) (pptA) [Staphylococcus aureus strain AG21-0600]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTAAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTATATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment