Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACM6AC_RS03195 Genome accession   NZ_CP181150
Coordinates   674671..675345 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain AG21-0600     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 669671..680345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AC_RS03170 (ACM6AC_03170) - 669886..670953 (+) 1068 WP_000980142.1 membrane protein -
  ACM6AC_RS03175 (ACM6AC_03175) - 671104..672147 (+) 1044 WP_154283738.1 alpha/beta hydrolase -
  ACM6AC_RS03180 (ACM6AC_03180) - 672476..672904 (+) 429 WP_000198495.1 hypothetical protein -
  ACM6AC_RS03185 (ACM6AC_03185) - 673113..673619 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACM6AC_RS03190 (ACM6AC_03190) graX 673732..674655 (+) 924 WP_154283739.1 auxiliary protein GraX/ApsX -
  ACM6AC_RS03195 (ACM6AC_03195) braR 674671..675345 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  ACM6AC_RS03200 (ACM6AC_03200) graS 675338..676378 (+) 1041 WP_154283740.1 histidine kinase GraS/ApsS -
  ACM6AC_RS03205 (ACM6AC_03205) vraF 676525..677286 (+) 762 WP_209205765.1 ABC transporter ATP-binding protein VraF -
  ACM6AC_RS03210 (ACM6AC_03210) - 677276..679165 (+) 1890 WP_416152464.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=978661 ACM6AC_RS03195 WP_001166505.1 674671..675345(+) (braR) [Staphylococcus aureus strain AG21-0600]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=978661 ACM6AC_RS03195 WP_001166505.1 674671..675345(+) (braR) [Staphylococcus aureus strain AG21-0600]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402