Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACM6AC_RS00120 Genome accession   NZ_CP181150
Coordinates   29966..30766 (+) Length   266 a.a.
NCBI ID   WP_416152429.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0600     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24966..35766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AC_RS00105 (ACM6AC_00105) walK 25628..27454 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  ACM6AC_RS00110 (ACM6AC_00110) yycH 27447..28781 (+) 1335 WP_154284436.1 two-component system activity regulator YycH -
  ACM6AC_RS00115 (ACM6AC_00115) - 28782..29570 (+) 789 WP_154284437.1 two-component system regulatory protein YycI -
  ACM6AC_RS00120 (ACM6AC_00120) vicX 29966..30766 (+) 801 WP_416152429.1 MBL fold metallo-hydrolase Regulator
  ACM6AC_RS00125 (ACM6AC_00125) adsA 30994..33312 (+) 2319 WP_154284438.1 LPXTG-anchored adenosine synthase AdsA -
  ACM6AC_RS00130 (ACM6AC_00130) rlmH 33680..34159 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACM6AC_RS00135 (ACM6AC_00135) - 34288..34467 (+) 180 WP_154284439.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30371.55 Da        Isoelectric Point: 6.1712

>NTDB_id=978652 ACM6AC_RS00120 WP_416152429.1 29966..30766(+) (vicX) [Staphylococcus aureus strain AG21-0600]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
DSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=978652 ACM6AC_RS00120 WP_416152429.1 29966..30766(+) (vicX) [Staphylococcus aureus strain AG21-0600]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GACAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474