Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACM598_RS06075 Genome accession   NZ_CP181148
Coordinates   1270988..1272139 (+) Length   383 a.a.
NCBI ID   WP_000020354.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0596     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1265988..1277139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM598_RS06050 (ACM598_06050) yfmH 1266818..1268104 (+) 1287 WP_086045381.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  ACM598_RS06055 (ACM598_06055) ymfI 1268104..1268808 (+) 705 WP_000646219.1 elongation factor P 5-aminopentanone reductase -
  ACM598_RS06060 (ACM598_06060) - 1268913..1269740 (+) 828 WP_000214890.1 YmfK family protein -
  ACM598_RS06065 (ACM598_06065) - 1269759..1270151 (+) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ACM598_RS06070 (ACM598_06070) pgsA 1270185..1270763 (+) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACM598_RS06075 (ACM598_06075) cinA 1270988..1272139 (+) 1152 WP_000020354.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACM598_RS06080 (ACM598_06080) recA 1272305..1273348 (+) 1044 WP_000368166.1 recombinase RecA -
  ACM598_RS06085 (ACM598_06085) rny 1273702..1275261 (+) 1560 WP_001050913.1 ribonuclease Y -
  ACM598_RS06090 (ACM598_06090) - 1275557..1275772 (-) 216 WP_000026308.1 hypothetical protein -
  ACM598_RS06095 (ACM598_06095) - 1275946..1276743 (+) 798 WP_001222103.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43167.38 Da        Isoelectric Point: 5.7673

>NTDB_id=978509 ACM598_RS06075 WP_000020354.1 1270988..1272139(+) (cinA) [Staphylococcus aureus strain AG21-0596]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETVLIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKINEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNLEFKTEQFKMSESRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=978509 ACM598_RS06075 WP_000020354.1 1270988..1272139(+) (cinA) [Staphylococcus aureus strain AG21-0596]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAATGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTTC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTA
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACACTCTGAACTATTAAGATTTGCTGGAATAGGTGA
ATCTAAAGTAGAAACAGTATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCAGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAGCAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTAATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTATTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
AGAATTTAAAACTGAGCAATTTAAAATGTCTGAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTTATAA
GGTTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433