Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACM6AW_RS08410 Genome accession   NZ_CP181145
Coordinates   1755454..1756728 (+) Length   424 a.a.
NCBI ID   WP_031771324.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0629     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1750454..1761728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AW_RS08390 (ACM6AW_08390) - 1751778..1751873 (+) 96 WP_031761395.1 hypothetical protein -
  ACM6AW_RS08395 (ACM6AW_08395) - 1751834..1752964 (-) 1131 WP_000721699.1 HAD family hydrolase -
  ACM6AW_RS08400 (ACM6AW_08400) nagE 1753071..1754537 (-) 1467 Protein_1653 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  ACM6AW_RS08405 (ACM6AW_08405) - 1754665..1755282 (-) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  ACM6AW_RS08410 (ACM6AW_08410) htrA 1755454..1756728 (+) 1275 WP_031771324.1 S1C family serine protease Regulator
  ACM6AW_RS08415 (ACM6AW_08415) tyrS 1756822..1758084 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  ACM6AW_RS08420 (ACM6AW_08420) - 1758466..1759371 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  ACM6AW_RS08425 (ACM6AW_08425) - 1759351..1759443 (-) 93 WP_031761401.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45779.95 Da        Isoelectric Point: 9.9696

>NTDB_id=978449 ACM6AW_RS08410 WP_031771324.1 1755454..1756728(+) (htrA) [Staphylococcus aureus strain AG21-0629]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVNEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=978449 ACM6AW_RS08410 WP_031771324.1 1755454..1756728(+) (htrA) [Staphylococcus aureus strain AG21-0629]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTAATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.811

0.37


Multiple sequence alignment