Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACM6AQ_RS08800 Genome accession   NZ_CP181136
Coordinates   1824815..1825555 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0619     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1819815..1830555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AQ_RS08775 (ACM6AQ_08775) hemH 1820692..1821615 (-) 924 WP_072491888.1 ferrochelatase -
  ACM6AQ_RS08780 (ACM6AQ_08780) hemE 1821673..1822710 (-) 1038 WP_000233534.1 uroporphyrinogen decarboxylase -
  ACM6AQ_RS08785 (ACM6AQ_08785) - 1822700..1822786 (-) 87 WP_031875110.1 hypothetical protein -
  ACM6AQ_RS08790 (ACM6AQ_08790) traP 1822972..1823475 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  ACM6AQ_RS08795 (ACM6AQ_08795) ecsB 1823599..1824822 (-) 1224 WP_072491887.1 ABC transporter permease EcsB -
  ACM6AQ_RS08800 (ACM6AQ_08800) pptA 1824815..1825555 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACM6AQ_RS08805 (ACM6AQ_08805) - 1825689..1826111 (+) 423 WP_000004981.1 HIT family protein -
  ACM6AQ_RS08810 (ACM6AQ_08810) - 1826253..1826618 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  ACM6AQ_RS08815 (ACM6AQ_08815) - 1827350..1827907 (+) 558 WP_416152813.1 DUF3267 domain-containing protein -
  ACM6AQ_RS08820 (ACM6AQ_08820) - 1828112..1829074 (+) 963 WP_000782119.1 foldase protein PrsA -
  ACM6AQ_RS08825 (ACM6AQ_08825) yhaM 1829195..1830136 (-) 942 WP_098817912.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=978097 ACM6AQ_RS08800 WP_000216874.1 1824815..1825555(-) (pptA) [Staphylococcus aureus strain AG21-0619]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=978097 ACM6AQ_RS08800 WP_000216874.1 1824815..1825555(-) (pptA) [Staphylococcus aureus strain AG21-0619]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGTCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment