Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACM6AQ_RS03570 Genome accession   NZ_CP181136
Coordinates   735664..736635 (+) Length   323 a.a.
NCBI ID   WP_072491652.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0619     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 730664..741635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AQ_RS03550 (ACM6AQ_03550) nrdI 731734..732132 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  ACM6AQ_RS03555 (ACM6AQ_03555) nrdE 732095..734200 (+) 2106 WP_416152854.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  ACM6AQ_RS03560 (ACM6AQ_03560) nrdF 734318..735289 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  ACM6AQ_RS03565 (ACM6AQ_03565) - 735470..735625 (+) 156 WP_031901244.1 hypothetical protein -
  ACM6AQ_RS03570 (ACM6AQ_03570) ceuB 735664..736635 (+) 972 WP_072491652.1 ABC transporter permease Machinery gene
  ACM6AQ_RS03575 (ACM6AQ_03575) - 736622..737578 (+) 957 WP_072491401.1 iron chelate uptake ABC transporter family permease subunit -
  ACM6AQ_RS03580 (ACM6AQ_03580) - 737575..738336 (+) 762 WP_072491402.1 ABC transporter ATP-binding protein -
  ACM6AQ_RS03585 (ACM6AQ_03585) - 738455..739483 (+) 1029 WP_000754450.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  ACM6AQ_RS03590 (ACM6AQ_03590) - 739744..740058 (-) 315 WP_001127269.1 CHY zinc finger protein -
  ACM6AQ_RS03595 (ACM6AQ_03595) murB 740076..740999 (-) 924 WP_000608440.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35610.14 Da        Isoelectric Point: 10.1368

>NTDB_id=978044 ACM6AQ_RS03570 WP_072491652.1 735664..736635(+) (ceuB) [Staphylococcus aureus strain AG21-0619]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVRIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=978044 ACM6AQ_RS03570 WP_072491652.1 735664..736635(+) (ceuB) [Staphylococcus aureus strain AG21-0619]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAGAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTCTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACGACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGTTTAGTTATTCCAAATATTATTTCGATTTATAGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471