Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACM6AQ_RS02510 | Genome accession | NZ_CP181136 |
| Coordinates | 519560..522016 (+) | Length | 818 a.a. |
| NCBI ID | WP_098817706.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AG21-0619 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 514560..527016
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AQ_RS02485 (ACM6AQ_02485) | pdxT | 515362..515922 (+) | 561 | WP_000690439.1 | pyridoxal 5'-phosphate synthase glutaminase subunit PdxT | - |
| ACM6AQ_RS02490 (ACM6AQ_02490) | - | 516131..517345 (-) | 1215 | WP_000547794.1 | NupC/NupG family nucleoside CNT transporter | - |
| ACM6AQ_RS02495 (ACM6AQ_02495) | - | 517503..517964 (+) | 462 | WP_000551762.1 | CtsR family transcriptional regulator | - |
| ACM6AQ_RS02500 (ACM6AQ_02500) | - | 517983..518549 (+) | 567 | WP_000882069.1 | UvrB/UvrC motif-containing protein | - |
| ACM6AQ_RS02505 (ACM6AQ_02505) | - | 518539..519546 (+) | 1008 | WP_000149503.1 | protein arginine kinase | - |
| ACM6AQ_RS02510 (ACM6AQ_02510) | clpC | 519560..522016 (+) | 2457 | WP_098817706.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ACM6AQ_RS02515 (ACM6AQ_02515) | radA/sms | 522506..523870 (+) | 1365 | WP_001085219.1 | DNA repair protein RadA | Machinery gene |
| ACM6AQ_RS02520 (ACM6AQ_02520) | - | 523895..524968 (+) | 1074 | WP_001028373.1 | PIN/TRAM domain-containing protein | - |
| ACM6AQ_RS02525 (ACM6AQ_02525) | gltX | 525525..526979 (+) | 1455 | WP_000071071.1 | glutamate--tRNA ligase | - |
Sequence
Protein
Download Length: 818 a.a. Molecular weight: 91065.39 Da Isoelectric Point: 5.5404
>NTDB_id=978037 ACM6AQ_RS02510 WP_098817706.1 519560..522016(+) (clpC) [Staphylococcus aureus strain AG21-0619]
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIRQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVI
AGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELK
EIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDGKE
FKYDIAEQTSETKTPSQA
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIRQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVI
AGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELK
EIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDGKE
FKYDIAEQTSETKTPSQA
Nucleotide
Download Length: 2457 bp
>NTDB_id=978037 ACM6AQ_RS02510 WP_098817706.1 519560..522016(+) (clpC) [Staphylococcus aureus strain AG21-0619]
ATGTTATTTGGTAGATTAACTGAACGTGCACAGCGCGTATTAGCACATGCACAAGAAGAAGCAATTCGTTTAAATCATTC
AAATATAGGAACAGAACACCTATTATTGGGGTTAATGAAAGAACCTGAAGGAATTGCTGCAAAAGTATTAGAAAGTTTTA
ATATCACTGAAGATAAAGTAATTGAAGAAGTTGAAAAATTAATTGGACATGGTCAAGATCATGTTGGTACATTGCATTAT
ACACCTAGAGCTAAAAAAGTCATTGAATTATCGATGGATGAAGCTAGAAAATTACATCACAATTTTGTTGGAACGGAACA
TATTTTATTAGGCTTGATTCGTGAAAATGAAGGTGTTGCAGCAAGAGTTTTTGCAAATCTAGATTTAAATATTACTAAAG
CACGTGCACAAGTTGTGAAAGCTTTAGGAAACCCTGAAATGAGTAATAAAAATGCACAAGCTAGTAAGTCAAATAATACT
CCAACTTTAGATAGTTTAGCTCGTGACTTAACAGTCATTGCCAAAGACGGTACATTAGATCCTGTTATAGGACGTGATAA
AGAAATTACACGTGTAATTGAAGTTTTAAGTAGACGTACGAAAAACAATCCTGTACTTATTGGAGAACCAGGTGTTGGTA
AAACTGCTATTGCTGAAGGTTTAGCGCAAGCCATAGTGAATAATGAGGTGCCAGAGACATTAAAAGATAAGCGTGTTATG
TCTTTAGATATGGGAACAGTAGTTGCAGGTACTAAATATCGTGGTGAATTTGAAGAGCGTCTGAAAAAGGTTATGGAAGA
AATCCGACAAGCAGGTAATGTCATCCTATTTATTGATGAGTTGCATACTTTAGTTGGTGCTGGTGGTGCTGAAGGTGCTA
TCGATGCTTCGAATATTTTGAAACCGGCATTAGCACGTGGTGAATTACAATGTATTGGTGCTACTACATTAGATGAATAT
CGCAAAAATATTGAAAAAGACGCGGCTTTAGAACGTCGTTTCCAACCTGTACAAGTTGATGAACCTTCAGTAGTAGATAC
AGTCGCTATTTTAAAAGGATTAAGAGATCGTTACGAAGCACACCATCGTATTAATATTTCAGACGAAGCTATTGAAGCAG
CTGTTAAATTAAGTAACAGATACGTTTCAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCAAGTTCT
AAAGTAAGACTTAAGAGTCATACGACACCTAATAATTTAAAAGAAATTGAACAAGAAATTGAAAAAGTTAAAAATGAAAA
AGATGCCGCAGTACATGCTCAAGAGTTTGAAAATGCTGCTAATCTGCGTGATAAACAAACAAAACTTGAAAAGCAATATG
AAGAAGCTAAAAATGAATGGAAGAACGCACAAAATGGCATGTCAACTTCATTGTCAGAAGAAGATATTGCTGAAGTCATT
GCAGGATGGACAGGTATCCCATTAACTAAAATCAATGAAACAGAATCTGAAAAACTTCTTAGTCTAGAAGATACATTACA
TGAGAGAGTTATTGGGCAAAAAGATGCTGTTAATTCAATCAGTAAAGCGGTTAGACGTGCCCGTGCAGGGTTAAAAGATC
CTAAACGACCAATTGGTAGCTTTATCTTCCTTGGACCAACTGGTGTTGGTAAAACTGAATTAGCTAGAGCTTTAGCTGAA
TCAATGTTCGGCGATGATGATGCGATGATCCGTGTAGACATGAGTGAATTTATGGAAAAACACGCAGTGAGCCGATTAGT
TGGTGCTCCTCCAGGATATGTTGGTCATGATGATGGTGGACAATTAACTGAAAAAGTTAGACGTAAACCATATTCTGTAA
TTTTATTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATTCTATTACAAGTTTTAGATGACGGACATTTGACA
GATACAAAAGGACGTACAGTTGATTTTAGAAATACAATTATCATAATGACATCAAACGTTGGAGCACAAGAATTACAAGA
TCAACGATTTGCTGGATTCGGTGGTTCAAGTGATGGACAAGATTATGAAACAATTCGAAAAACGATGTTAAAAGAATTAA
AAAATTCATTCCGTCCAGAATTTTTAAACCGTGTAGATGATATCATTGTATTCCATAAACTAACAAAAGAAGAATTAAAA
GAAATTGTAACAATGATGGTTAATAAATTAACAAATCGATTATCTGAACAAAACATAAATATTATTGTTACTGATAAAGC
GAAAGACAAAATCGCAGAAGAAGGATATGATCCAGAATATGGTGCAAGACCATTAATTAGAGCGATACAAAAAACTATCG
AAGATAATTTAAGTGAATTAATATTAGATGGTAATCAAATTGAAGGTAAGAAAGTTACAGTAGATCATGATGGTAAAGAG
TTTAAATATGACATTGCTGAACAAACTTCAGAAACTAAAACACCATCGCAAGCATAA
ATGTTATTTGGTAGATTAACTGAACGTGCACAGCGCGTATTAGCACATGCACAAGAAGAAGCAATTCGTTTAAATCATTC
AAATATAGGAACAGAACACCTATTATTGGGGTTAATGAAAGAACCTGAAGGAATTGCTGCAAAAGTATTAGAAAGTTTTA
ATATCACTGAAGATAAAGTAATTGAAGAAGTTGAAAAATTAATTGGACATGGTCAAGATCATGTTGGTACATTGCATTAT
ACACCTAGAGCTAAAAAAGTCATTGAATTATCGATGGATGAAGCTAGAAAATTACATCACAATTTTGTTGGAACGGAACA
TATTTTATTAGGCTTGATTCGTGAAAATGAAGGTGTTGCAGCAAGAGTTTTTGCAAATCTAGATTTAAATATTACTAAAG
CACGTGCACAAGTTGTGAAAGCTTTAGGAAACCCTGAAATGAGTAATAAAAATGCACAAGCTAGTAAGTCAAATAATACT
CCAACTTTAGATAGTTTAGCTCGTGACTTAACAGTCATTGCCAAAGACGGTACATTAGATCCTGTTATAGGACGTGATAA
AGAAATTACACGTGTAATTGAAGTTTTAAGTAGACGTACGAAAAACAATCCTGTACTTATTGGAGAACCAGGTGTTGGTA
AAACTGCTATTGCTGAAGGTTTAGCGCAAGCCATAGTGAATAATGAGGTGCCAGAGACATTAAAAGATAAGCGTGTTATG
TCTTTAGATATGGGAACAGTAGTTGCAGGTACTAAATATCGTGGTGAATTTGAAGAGCGTCTGAAAAAGGTTATGGAAGA
AATCCGACAAGCAGGTAATGTCATCCTATTTATTGATGAGTTGCATACTTTAGTTGGTGCTGGTGGTGCTGAAGGTGCTA
TCGATGCTTCGAATATTTTGAAACCGGCATTAGCACGTGGTGAATTACAATGTATTGGTGCTACTACATTAGATGAATAT
CGCAAAAATATTGAAAAAGACGCGGCTTTAGAACGTCGTTTCCAACCTGTACAAGTTGATGAACCTTCAGTAGTAGATAC
AGTCGCTATTTTAAAAGGATTAAGAGATCGTTACGAAGCACACCATCGTATTAATATTTCAGACGAAGCTATTGAAGCAG
CTGTTAAATTAAGTAACAGATACGTTTCAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCAAGTTCT
AAAGTAAGACTTAAGAGTCATACGACACCTAATAATTTAAAAGAAATTGAACAAGAAATTGAAAAAGTTAAAAATGAAAA
AGATGCCGCAGTACATGCTCAAGAGTTTGAAAATGCTGCTAATCTGCGTGATAAACAAACAAAACTTGAAAAGCAATATG
AAGAAGCTAAAAATGAATGGAAGAACGCACAAAATGGCATGTCAACTTCATTGTCAGAAGAAGATATTGCTGAAGTCATT
GCAGGATGGACAGGTATCCCATTAACTAAAATCAATGAAACAGAATCTGAAAAACTTCTTAGTCTAGAAGATACATTACA
TGAGAGAGTTATTGGGCAAAAAGATGCTGTTAATTCAATCAGTAAAGCGGTTAGACGTGCCCGTGCAGGGTTAAAAGATC
CTAAACGACCAATTGGTAGCTTTATCTTCCTTGGACCAACTGGTGTTGGTAAAACTGAATTAGCTAGAGCTTTAGCTGAA
TCAATGTTCGGCGATGATGATGCGATGATCCGTGTAGACATGAGTGAATTTATGGAAAAACACGCAGTGAGCCGATTAGT
TGGTGCTCCTCCAGGATATGTTGGTCATGATGATGGTGGACAATTAACTGAAAAAGTTAGACGTAAACCATATTCTGTAA
TTTTATTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATTCTATTACAAGTTTTAGATGACGGACATTTGACA
GATACAAAAGGACGTACAGTTGATTTTAGAAATACAATTATCATAATGACATCAAACGTTGGAGCACAAGAATTACAAGA
TCAACGATTTGCTGGATTCGGTGGTTCAAGTGATGGACAAGATTATGAAACAATTCGAAAAACGATGTTAAAAGAATTAA
AAAATTCATTCCGTCCAGAATTTTTAAACCGTGTAGATGATATCATTGTATTCCATAAACTAACAAAAGAAGAATTAAAA
GAAATTGTAACAATGATGGTTAATAAATTAACAAATCGATTATCTGAACAAAACATAAATATTATTGTTACTGATAAAGC
GAAAGACAAAATCGCAGAAGAAGGATATGATCCAGAATATGGTGCAAGACCATTAATTAGAGCGATACAAAAAACTATCG
AAGATAATTTAAGTGAATTAATATTAGATGGTAATCAAATTGAAGGTAAGAAAGTTACAGTAGATCATGATGGTAAAGAG
TTTAAATATGACATTGCTGAACAAACTTCAGAAACTAAAACACCATCGCAAGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
70.537 |
97.922 |
0.691 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.407 |
99.756 |
0.483 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus pneumoniae Rx1 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus thermophilus LMD-9 |
44.498 |
100 |
0.45 |
| clpC | Streptococcus mutans UA159 |
44.217 |
100 |
0.449 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.377 |
100 |
0.449 |
| clpE | Streptococcus mutans UA159 |
54.784 |
79.218 |
0.434 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.145 |
76.039 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
54.984 |
76.039 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
54.984 |
76.039 |
0.418 |
| clpE | Streptococcus pneumoniae R6 |
54.984 |
76.039 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.301 |
79.707 |
0.417 |