Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACM6AQ_RS00120 Genome accession   NZ_CP181136
Coordinates   29967..30767 (+) Length   266 a.a.
NCBI ID   WP_098817949.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0619     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24967..35767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AQ_RS00105 (ACM6AQ_00105) walK 25636..27462 (+) 1827 WP_098817950.1 cell wall metabolism sensor histidine kinase WalK -
  ACM6AQ_RS00110 (ACM6AQ_00110) yycH 27455..28789 (+) 1335 WP_072491102.1 two-component system activity regulator YycH -
  ACM6AQ_RS00115 (ACM6AQ_00115) - 28790..29578 (+) 789 WP_416152836.1 two-component system regulatory protein YycI -
  ACM6AQ_RS00120 (ACM6AQ_00120) vicX 29967..30767 (+) 801 WP_098817949.1 MBL fold metallo-hydrolase Regulator
  ACM6AQ_RS00125 (ACM6AQ_00125) adsA 30994..33312 (+) 2319 WP_072491101.1 LPXTG-anchored adenosine synthase AdsA -
  ACM6AQ_RS00130 (ACM6AQ_00130) rlmH 33681..34160 (+) 480 WP_098817948.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACM6AQ_RS00135 (ACM6AQ_00135) - 34311..34811 (+) 501 WP_240025246.1 AAA family ATPase -
  ACM6AQ_RS00140 (ACM6AQ_00140) - 34801..35025 (+) 225 WP_224721088.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30283.49 Da        Isoelectric Point: 6.3392

>NTDB_id=978032 ACM6AQ_RS00120 WP_098817949.1 29967..30767(+) (vicX) [Staphylococcus aureus strain AG21-0619]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMADVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=978032 ACM6AQ_RS00120 WP_098817949.1 29967..30767(+) (vicX) [Staphylococcus aureus strain AG21-0619]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGGCAGACGTGATTACAGGTAACACGA
AGCGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment