Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   R8563_RS10815 Genome accession   NZ_AP026917
Coordinates   2078967..2079725 (+) Length   252 a.a.
NCBI ID   WP_000410380.1    Uniprot ID   A0A6G2D2R9
Organism   Streptococcus pneumoniae strain PZ900700007     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2073967..2084725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8563_RS10785 (PC0007_20740) comE 2074563..2075315 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  R8563_RS10790 (PC0007_20750) comD/comD1 2075312..2076637 (-) 1326 WP_001853914.1 competence system sensor histidine kinase ComD Regulator
  R8563_RS10795 (PC0007_20760) comC/comC1 2076658..2076783 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  R8563_RS10805 (PC0007_20770) rlmH 2077066..2077545 (-) 480 WP_000695930.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  R8563_RS10810 (PC0007_20780) htrA 2077728..2078909 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  R8563_RS10815 (PC0007_20790) spo0J 2078967..2079725 (+) 759 WP_000410380.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29179.54 Da        Isoelectric Point: 9.0305

>NTDB_id=97767 R8563_RS10815 WP_000410380.1 2078967..2079725(+) (spo0J) [Streptococcus pneumoniae strain PZ900700007]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNYFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=97767 R8563_RS10815 WP_000410380.1 2078967..2079725(+) (spo0J) [Streptococcus pneumoniae strain PZ900700007]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATTATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G2D2R9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment