Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   MGAS38289_RS08150 Genome accession   NZ_CP151440
Coordinates   1600849..1601919 (-) Length   356 a.a.
NCBI ID   WP_010921893.1    Uniprot ID   A0A4U9C068
Organism   Streptococcus pyogenes strain MGAS38289     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1595849..1606919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS38289_RS08140 - 1599812..1599895 (+) 84 Protein_1555 IS3 family transposase -
  MGAS38289_RS08145 (MGAS38289_03336) amiF 1599933..1600856 (-) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  MGAS38289_RS08150 (MGAS38289_03338) amiE 1600849..1601919 (-) 1071 WP_010921893.1 ABC transporter ATP-binding protein Regulator
  MGAS38289_RS08155 (MGAS38289_03340) amiD 1601928..1602854 (-) 927 WP_010921892.1 oligopeptide ABC transporter permease OppC Regulator
  MGAS38289_RS08160 (MGAS38289_03342) amiC 1602854..1604356 (-) 1503 WP_010921891.1 ABC transporter permease Regulator
  MGAS38289_RS08165 (MGAS38289_03344) amiA 1604421..1606391 (-) 1971 WP_011285389.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 39703.77 Da        Isoelectric Point: 5.6707

>NTDB_id=976946 MGAS38289_RS08150 WP_010921893.1 1600849..1601919(-) (amiE) [Streptococcus pyogenes strain MGAS38289]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=976946 MGAS38289_RS08150 WP_010921893.1 1600849..1601919(-) (amiE) [Streptococcus pyogenes strain MGAS38289]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGTCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTCATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTCGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACCATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGAAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9C068

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.667

100

0.775

  amiE Streptococcus thermophilus LMG 18311

75.556

100

0.764

  amiE Streptococcus thermophilus LMD-9

75.556

100

0.764

  oppD Streptococcus mutans UA159

56.677

94.663

0.537


Multiple sequence alignment