Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACM6AU_RS08720 Genome accession   NZ_CP181097
Coordinates   1818475..1819215 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0627     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813475..1824215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AU_RS08695 (ACM6AU_08695) hemH 1814352..1815275 (-) 924 WP_000162875.1 ferrochelatase -
  ACM6AU_RS08700 (ACM6AU_08700) hemE 1815332..1816369 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  ACM6AU_RS08705 (ACM6AU_08705) - 1816359..1816445 (-) 87 WP_031875110.1 hypothetical protein -
  ACM6AU_RS08710 (ACM6AU_08710) traP 1816631..1817134 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  ACM6AU_RS08715 (ACM6AU_08715) ecsB 1817259..1818482 (-) 1224 WP_001245753.1 ABC transporter permease EcsB -
  ACM6AU_RS08720 (ACM6AU_08720) pptA 1818475..1819215 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACM6AU_RS08725 (ACM6AU_08725) - 1819349..1819771 (+) 423 WP_000004985.1 HIT family protein -
  ACM6AU_RS08730 (ACM6AU_08730) - 1819913..1820278 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  ACM6AU_RS08735 (ACM6AU_08735) - 1821010..1821567 (+) 558 WP_000477957.1 DUF3267 domain-containing protein -
  ACM6AU_RS08740 (ACM6AU_08740) - 1821772..1822734 (+) 963 WP_000782119.1 foldase protein PrsA -
  ACM6AU_RS08745 (ACM6AU_08745) yhaM 1822855..1823796 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=976682 ACM6AU_RS08720 WP_000216874.1 1818475..1819215(-) (pptA) [Staphylococcus aureus strain AG21-0627]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=976682 ACM6AU_RS08720 WP_000216874.1 1818475..1819215(-) (pptA) [Staphylococcus aureus strain AG21-0627]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGTGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATATACGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTTCTTGGCTTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment