Detailed information NTG0976316

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM3FI_RS21105
• Genome accession: NZ_CP180700
• Coordinates: 4422863..4423888 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUPS05
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4417863..4428888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM3FI_RS21085 (ACM3FI_21085)	metJ	4418924..4419241 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACM3FI_RS21090 (ACM3FI_21090)	yiiX	4419425..4420033 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACM3FI_RS21095 (ACM3FI_21095)	rpmE	4420094..4420306 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM3FI_RS21100 (ACM3FI_21100)	priA	4420509..4422707 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACM3FI_RS21105 (ACM3FI_21105)	cytR	4422863..4423888 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM3FI_RS21110 (ACM3FI_21110)	ftsN	4423980..4424939 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACM3FI_RS21115 (ACM3FI_21115)	hslV	4425032..4425562 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM3FI_RS21120 (ACM3FI_21120)	hslU	4425572..4426903 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACM3FI_RS21125 (ACM3FI_21125)	menA	4426970..4427896 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM3FI_RS21130 (ACM3FI_21130)	rraA	4427989..4428474 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM3FI_RS21135 (ACM3FI_21135)	zapB	4428559..4428804 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=976316 ACM3FI_RS21105 WP_000644904.1 4422863..4423888(+) (cytR) [Escherichia coli strain CUPS05]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=976316 ACM3FI_RS21105 WP_000644904.1 4422863..4423888(+) (cytR) [Escherichia coli strain CUPS05]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATTATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628