Detailed information NTG0976202

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM3FK_RS13460
• Genome accession: NZ_CP180694
• Coordinates: 2760257..2761282 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUPS04
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2755257..2766282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM3FK_RS13450 (ACM3FK_13450)	rpmE	2757488..2757700 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM3FK_RS13455 (ACM3FK_13455)	priA	2757903..2760101 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACM3FK_RS13460 (ACM3FK_13460)	cytR	2760257..2761282 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM3FK_RS13465 (ACM3FK_13465)	ftsN	2761374..2762333 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACM3FK_RS13470 (ACM3FK_13470)	hslV	2762426..2762956 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM3FK_RS13475 (ACM3FK_13475)	hslU	2762966..2764297 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACM3FK_RS13480 (ACM3FK_13480)	menA	2764364..2765290 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM3FK_RS13485 (ACM3FK_13485)	rraA	2765383..2765868 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM3FK_RS13490 (ACM3FK_13490)	zapB	2765953..2766198 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=976202 ACM3FK_RS13460 WP_000644904.1 2760257..2761282(+) (cytR) [Escherichia coli strain CUPS04]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=976202 ACM3FK_RS13460 WP_000644904.1 2760257..2761282(+) (cytR) [Escherichia coli strain CUPS04]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628