Detailed information NTG0976152

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM3FH_RS21980
• Genome accession: NZ_CP180690
• Coordinates: 4504722..4505747 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUPS03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4499722..4510747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM3FH_RS21960 (ACM3FH_21960)	metJ	4500783..4501100 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACM3FH_RS21965 (ACM3FH_21965)	yiiX	4501284..4501892 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACM3FH_RS21970 (ACM3FH_21970)	rpmE	4501953..4502165 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM3FH_RS21975 (ACM3FH_21975)	priA	4502368..4504566 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACM3FH_RS21980 (ACM3FH_21980)	cytR	4504722..4505747 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM3FH_RS21985 (ACM3FH_21985)	ftsN	4505839..4506798 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACM3FH_RS21990 (ACM3FH_21990)	hslV	4506891..4507421 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM3FH_RS21995 (ACM3FH_21995)	hslU	4507431..4508762 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACM3FH_RS22000 (ACM3FH_22000)	menA	4508829..4509755 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM3FH_RS22005 (ACM3FH_22005)	rraA	4509848..4510333 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM3FH_RS22010 (ACM3FH_22010)	zapB	4510418..4510663 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=976152 ACM3FH_RS21980 WP_000644904.1 4504722..4505747(+) (cytR) [Escherichia coli strain CUPS03]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=976152 ACM3FH_RS21980 WP_000644904.1 4504722..4505747(+) (cytR) [Escherichia coli strain CUPS03]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628