Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   R8775_RS08715 Genome accession   NZ_AP026915
Coordinates   1684040..1684750 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain PZ900700005     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1679040..1689750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8775_RS08700 (PC0005_17180) - 1679581..1679829 (-) 249 WP_317681014.1 YneF family protein -
  R8775_RS08705 (PC0005_17190) treC 1680085..1681710 (-) 1626 WP_050233417.1 alpha,alpha-phosphotrehalase -
  R8775_RS08710 (PC0005_17200) treP 1681888..1683855 (-) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  R8775_RS08715 (PC0005_17210) treR 1684040..1684750 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  R8775_RS08720 (PC0005_17220) - 1684783..1685586 (-) 804 WP_000157656.1 ABC transporter ATP-binding protein -
  R8775_RS08725 - 1685599..1686476 (-) 878 Protein_1729 ABC transporter permease -
  R8775_RS08730 - 1686488..1687297 (-) 810 Protein_1730 ABC transporter substrate-binding protein -
  R8775_RS08735 (PC0005_17270) amiF 1687916..1688842 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=97578 R8775_RS08715 WP_000760673.1 1684040..1684750(+) (treR) [Streptococcus pneumoniae strain PZ900700005]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=97578 R8775_RS08715 WP_000760673.1 1684040..1684750(+) (treR) [Streptococcus pneumoniae strain PZ900700005]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment