Detailed information NTG0975618

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABTY65_RS21055
• Genome accession: NZ_CP180604
• Coordinates: 4368738..4369763 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PS2Canimalfeces3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4363738..4374763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABTY65_RS21045 (ABTY65_021045)	rpmE	4365969..4366181 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABTY65_RS21050 (ABTY65_021050)	priA	4366384..4368582 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
ABTY65_RS21055 (ABTY65_021055)	cytR	4368738..4369763 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABTY65_RS21060 (ABTY65_021060)	ftsN	4369855..4370814 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABTY65_RS21065 (ABTY65_021065)	hslV	4370907..4371437 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABTY65_RS21070 (ABTY65_021070)	hslU	4371447..4372778 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ABTY65_RS21075 (ABTY65_021075)	menA	4372845..4373771 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABTY65_RS21080 (ABTY65_021080)	rraA	4373864..4374349 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABTY65_RS21085 (ABTY65_021085)	zapB	4374434..4374679 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=975618 ABTY65_RS21055 WP_000644904.1 4368738..4369763(+) (cytR) [Escherichia coli strain PS2Canimalfeces3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=975618 ABTY65_RS21055 WP_000644904.1 4368738..4369763(+) (cytR) [Escherichia coli strain PS2Canimalfeces3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628