Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   AAC899_RS14825 Genome accession   NZ_CP151168
Coordinates   3146360..3146686 (-) Length   108 a.a.
NCBI ID   WP_004932341.1    Uniprot ID   A0A0M1I6N5
Organism   Acinetobacter soli strain HY24     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 3141360..3151686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS14805 (AAC899_14805) - 3141528..3142190 (-) 663 WP_171493576.1 FHA domain-containing protein -
  AAC899_RS14810 (AAC899_14810) gspD 3142260..3144563 (-) 2304 WP_151978757.1 type II secretion system secretin GspD -
  AAC899_RS14815 (AAC899_14815) - 3144604..3145455 (-) 852 WP_218262210.1 type II secretion system protein N -
  AAC899_RS14820 (AAC899_14820) gspN 3145455..3146198 (-) 744 WP_218262209.1 type II secretion system protein N -
  AAC899_RS14825 (AAC899_14825) hns 3146360..3146686 (-) 327 WP_004932341.1 H-NS histone family protein Regulator
  AAC899_RS14830 (AAC899_14830) - 3146891..3147331 (-) 441 WP_055415470.1 thioesterase family protein -
  AAC899_RS14835 (AAC899_14835) - 3147340..3148533 (-) 1194 WP_048766027.1 hypothetical protein -
  AAC899_RS14840 (AAC899_14840) - 3148545..3149375 (-) 831 WP_288399041.1 hypothetical protein -
  AAC899_RS14845 (AAC899_14845) - 3149387..3150154 (-) 768 WP_288390088.1 uroporphyrinogen-III synthase -
  AAC899_RS14850 (AAC899_14850) hemC 3150157..3151080 (-) 924 WP_151840387.1 hydroxymethylbilane synthase -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12410.04 Da        Isoelectric Point: 5.3410

>NTDB_id=975594 AAC899_RS14825 WP_004932341.1 3146360..3146686(-) (hns) [Acinetobacter soli strain HY24]
MKPDISELSVEDLKRLQAEAEQLIASKKDQAIEDAYNQILEVAESVGYSVEQLLEYGAQKRKKTTRKSVEPRYRSKSNPE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=975594 AAC899_RS14825 WP_004932341.1 3146360..3146686(-) (hns) [Acinetobacter soli strain HY24]
ATGAAACCAGATATTAGCGAATTATCCGTTGAAGATTTAAAGCGTTTGCAAGCAGAAGCTGAGCAACTTATTGCCTCTAA
AAAAGATCAAGCAATTGAAGATGCGTATAACCAAATTTTAGAAGTTGCTGAAAGTGTGGGGTATAGCGTTGAGCAGTTAC
TTGAATACGGCGCACAAAAACGTAAGAAAACAACACGTAAATCTGTAGAGCCACGCTATCGCAGCAAGAGCAATCCAGAA
GAAACGTGGACTGGTCGTGGTAAACAACCGCGCTGGTTAGTCGCTGAGCTTGAAAAAGGTGCAAAATTAGAAGATTTCCT
TATCTAA

Domains


Predicted by InterproScan.

(13-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M1I6N5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

88.889

100

0.889


Multiple sequence alignment