Detailed information NTG0975499

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AADH43_RS14595
• Genome accession: NZ_CP151155
• Coordinates: 3132935..3133942 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain vp-pir-201806
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3127935..3138942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADH43_RS14575 (AADH43_14575)	rplC	3128469..3129098 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
AADH43_RS14580 (AADH43_14580)	rpsJ	3129113..3129424 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
AADH43_RS14585 (AADH43_14585)	rpmE	3129882..3130103 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
AADH43_RS14590 (AADH43_14590)	priA	3130398..3132602 (+)	2205	WP_108744570.1	primosomal protein N'	-
AADH43_RS14595 (AADH43_14595)	cytR	3132935..3133942 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
AADH43_RS14600 (AADH43_14600)	ftsN	3134119..3134664 (+)	546	WP_005481405.1	cell division protein FtsN	-
AADH43_RS14605 (AADH43_14605)	hslV	3134829..3135380 (+)	552	WP_108744571.1	ATP-dependent protease subunit HslV	-
AADH43_RS14610 (AADH43_14610)	hslU	3135404..3136735 (+)	1332	WP_108744572.1	HslU--HslV peptidase ATPase subunit	-
AADH43_RS14615 (AADH43_14615)	-	3137160..3137384 (-)	225	WP_029864913.1	hypothetical protein	-
AADH43_RS14620 (AADH43_14620)	-	3137544..3137693 (-)	150	WP_108744573.1	AlpA family phage regulatory protein	-
AADH43_RS14625 (AADH43_14625)	radC	3137864..3138337 (+)	474	WP_053317965.1	DNA repair protein RadC	-
AADH43_RS14630 (AADH43_14630)	-	3138334..3138765 (+)	432	WP_029864910.1	DUF2787 family protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=975499 AADH43_RS14595 WP_005481416.1 3132935..3133942(+) (cytR) [Vibrio parahaemolyticus strain vp-pir-201806]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=975499 AADH43_RS14595 WP_005481416.1 3132935..3133942(+) (cytR) [Vibrio parahaemolyticus strain vp-pir-201806]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTACACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTGTTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGTGTTCCACAAGATCT
GTCGGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTCGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904