Detailed information NTG0975445

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: AADH38_RS13665
• Genome accession: NZ_CP151152
• Coordinates: 2690694..2691647 (-)
• Length: 317 a.a.
• NCBI ID: WP_011247737.1
• Uniprot ID: Q5WDY1
• Organism: Shouchella clausii strain TIL-19t
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2680203..2689754	2690694..2691647	flank	940

Gene organization within MGE regions

Location: 2680203..2691647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADH38_RS13600	-	2680203..2680961 (+)	759	WP_011247724.1	ABC transporter ATP-binding protein	-
AADH38_RS13605	-	2680978..2681745 (+)	768	WP_050749056.1	ABC transporter permease	-
AADH38_RS13610	ytkD	2681771..2682253 (-)	483	WP_011247726.1	RNA deprotection pyrophosphohydrolase	-
AADH38_RS13615	-	2682319..2683533 (-)	1215	WP_306204237.1	MFS transporter	-
AADH38_RS13620	-	2683658..2684149 (-)	492	WP_011247728.1	YwpF-like family protein	-
AADH38_RS13625	-	2684189..2684341 (-)	153	WP_156323123.1	hypothetical protein	-
AADH38_RS13630	-	2684428..2685603 (-)	1176	WP_035201992.1	MalY/PatB family protein	-
AADH38_RS13635	-	2685759..2686382 (+)	624	WP_011247731.1	deoxynucleoside kinase	-
AADH38_RS13640	-	2686394..2687023 (+)	630	WP_011247732.1	deoxynucleoside kinase	-
AADH38_RS13645	-	2687062..2687670 (-)	609	WP_011247733.1	restriction endonuclease	-
AADH38_RS13650	-	2687845..2688816 (-)	972	WP_011247734.1	siderophore ABC transporter substrate-binding protein	-
AADH38_RS13655	-	2688933..2689754 (-)	822	WP_208610215.1	ATP-binding cassette domain-containing protein	-
AADH38_RS13660	-	2689751..2690704 (-)	954	WP_051881152.1	iron chelate uptake ABC transporter family permease subunit	-
AADH38_RS13665	ceuB	2690694..2691647 (-)	954	WP_011247737.1	ABC transporter permease	Machinery gene

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35003.22 Da
• Isoelectric Point: 10.1201

>NTDB_id=975445 AADH38_RS13665 WP_011247737.1 2690694..2691647(-) (ceuB) [Shouchella clausii strain TIL-19t]
MKIKYLLPLLLILSFASLFIGVQDISPLDLFRLDDEDVQTLVISRIPRLLSVLIVGVSLSVCGLIMQQLTQNKFVSPTTA
GTMDWARLGILVAVVVFTQATTLQRMFIAFLFALFGTFLFMKILERIRFKNVVFVPLVGLMLGSVVNSITTFLAYRYDLV
QSLSSWMQGSFSLVLKGRYEILYIGIPLVVIAFLFANRFTVAGMGKDFSTNLGLNYNQIMNIGLFIVAMITATIVVTIGS
IPFLGLVIPNIVSIIRGDNLKNSLPHTALLGAIFLLACDILGRVLIYPYEIPIGLVVGVVGSAIFLYLLLRRRSHAA

Nucleotide

• Length: 954 bp

>NTDB_id=975445 AADH38_RS13665 WP_011247737.1 2690694..2691647(-) (ceuB) [Shouchella clausii strain TIL-19t]
ATGAAAATAAAATATTTACTCCCTTTGCTTTTAATTTTATCGTTTGCATCTTTATTTATTGGCGTACAGGATATATCGCC
ACTTGACTTATTTCGTTTAGACGATGAAGATGTGCAAACACTTGTCATTAGCCGTATCCCCCGTCTATTGAGTGTATTGA
TTGTTGGTGTTAGTTTAAGCGTTTGCGGTTTAATTATGCAGCAGCTTACACAAAACAAATTTGTTTCGCCGACAACAGCT
GGAACTATGGATTGGGCTCGGCTTGGCATTCTTGTCGCCGTGGTTGTTTTTACACAAGCGACCACGTTGCAAAGGATGTT
TATTGCCTTTCTTTTTGCGTTGTTTGGAACGTTTCTTTTTATGAAAATACTGGAGCGCATCCGCTTTAAAAACGTTGTGT
TTGTCCCGCTTGTCGGGCTTATGTTAGGCAGTGTGGTCAACTCAATCACGACTTTTCTAGCTTACCGGTATGATTTAGTG
CAAAGCTTATCTTCTTGGATGCAAGGGAGCTTTTCACTCGTTCTTAAAGGGCGCTATGAAATTTTATACATAGGCATTCC
CCTTGTTGTCATTGCCTTTTTATTCGCAAATCGCTTTACGGTAGCAGGAATGGGGAAGGATTTTTCGACAAACTTGGGCT
TAAATTATAACCAAATTATGAATATCGGCCTTTTCATTGTCGCGATGATCACGGCTACGATTGTCGTCACAATTGGCTCA
ATTCCTTTTTTAGGGCTAGTCATTCCTAACATCGTTTCGATTATAAGAGGGGACAACTTAAAAAACAGTTTGCCTCATAC
AGCGCTATTAGGCGCCATTTTCTTGCTCGCTTGTGATATTTTAGGGCGTGTTCTCATTTATCCATATGAAATTCCGATTG
GACTGGTCGTTGGGGTTGTCGGGAGCGCGATCTTTTTGTACTTGCTCTTAAGGAGACGATCTCATGCAGCCTAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (9-311)

3D structure

• AlphaFold DB: Q5WDY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	49.367	99.685	0.492