Detailed information NTG0975079

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACK2OW_RS19485
• Genome accession: NZ_CP180575
• Coordinates: 3743077..3744198 (-)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain K3C
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3738077..3749198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2OW_RS19465 (ACK2OW_19465)	znuC	3738585..3739280 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
ACK2OW_RS19470 (ACK2OW_19470)	znuA	3739335..3740294 (-)	960	WP_038828539.1	metal ABC transporter substrate-binding protein	-
ACK2OW_RS19475 (ACK2OW_19475)	ycdG	3740482..3742167 (-)	1686	WP_120027752.1	glycoside hydrolase family 13 protein	-
ACK2OW_RS19480 (ACK2OW_19480)	ycdF	3742192..3742968 (-)	777	WP_003234739.1	SDR family oxidoreductase	-
ACK2OW_RS19485 (ACK2OW_19485)	rapF	3743077..3744198 (-)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
ACK2OW_RS19490 (ACK2OW_19490)	cwlK	3744321..3744824 (+)	504	WP_041053078.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ACK2OW_RS19495 (ACK2OW_19495)	ycdC	3744821..3746194 (-)	1374	WP_249849591.1	YcdB/YcdC domain-containing protein	-
ACK2OW_RS19500 (ACK2OW_19500)	ycdB	3746381..3747802 (-)	1422	WP_249849590.1	YcdB/YcdC domain-containing protein	-
ACK2OW_RS19505 (ACK2OW_19505)	-	3747976..3748128 (+)	153	WP_021481864.1	hypothetical protein	-
ACK2OW_RS19510 (ACK2OW_19510)	ycdA	3748129..3749193 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=975079 ACK2OW_RS19485 WP_003234740.1 3743077..3744198(-) (rapF) [Bacillus subtilis strain K3C]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=975079 ACK2OW_RS19485 WP_003234740.1 3743077..3744198(-) (rapF) [Bacillus subtilis strain K3C]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405